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RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_36_15

Organism: Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_42_100

near complete RP 46 / 55 BSCG 48 / 51 ASCG 11 / 38
Location: comp(15830..17146)

Top 3 Functional Annotations

Value Algorithm Source
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 438.0
  • Bit_score: 879
  • Evalue 1.50e-252
Diaminopimelate decarboxylase id=4908523 bin=GWC2_Alphaproteobacteria_42_16 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 439.0
  • Bit_score: 879
  • Evalue 1.00e-252
diaminopimelate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 438.0
  • Bit_score: 369
  • Evalue 9.90e-100

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Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1317
ATGAAACTAAAAGGTTTTTCAGTAAATGGGGCTGGAAATTTAGTTCTTAACGGCGTTGATTTGGTTAGCCTCTCTCGAGAAAGTGAGCGGCCCATCTATGTCTTTAATGAGTTATTGATACGTGAAAATTTACGCCTTTATCAAAAAGCCCTATCCCTTTTTTATCCAAAATCCAGCTCTATTTTTTATGCCTCAAAAGCCTTTTTGAACCTTGCTATGGCCTCTTTGATCAAGCAAGAGGGGGTTGGTATCGATGTGTGTTCAGGAGGGGAGCTTTTTATAGCTCAATCAGCAAAAATTCCATCTGACAAAATTCTTATGCATGGGAACAACAAATCAAGAAGAGAACTTCAAGCCGCCGTAGAGTATGGTGTTAAAAAAATTGTAGTTGATAATGTGGAAGAATTAGCCCTTCTTCAACATATTACGGCAAGTTTAAAAAAAGAGTGTAGTGTTTTGCTGCGCCTTAACCCCGGGCTTGATGATATAGAAACCCATAAATACATGGTCACAGGGGCAAAGGACTCAAAGTTTGGTTTTCATGTAGATCGGACAAAAATTGCTGAAATCATAAATGATGCCTGTTCCAGAGGATATATAAAATTTAAGGGTCTCCATTTTCATATTGGGTCAAACCTTCAAAAAGTCTCTTTTTACGAGCATGCCTTGGATAAGGTTTTTGATTTTGTTGTTTTTCTTAAAGAAAAAGGGATAGAAATTGAAGAGCTGAATATGGGTGGGGGTTTGGGCATAGCCTATCAAGATCATGATCCTCTTCCTGATATAGAAAAGTTTATTAAAACCTTATCTCAGAAAGTGATACAGCTCTGTGAAGACAAAGGGATTCCTCTTCCTCATTTAATGTTTGAACCTGGGCGGTCGATTGTAGGTCCAGCAGGGTGTACTCTTTATAAGATAGGCTCCATCAAAAGGGGACCCAACAAAATCCTTTATGCGGCTGTAAATGGAGGTATGACAGATAACTTAAGGCCGGCTCTTTATCAAGCCAAACACACGGCTGTTCTGGCCAACAGGATGAATGAGCCAGATAGTGACCAGCCCTATAAAATTGTGGGAAACTGTTGCGAGACAGGGGATATATTAATCGAAAATATCCATCTTCCTCATTGTGTTGAGGGAGATGTTCTCGTTATTTTTTCAACAGGAGCTTATACTCATTCAATGGTGAACAATTATAATAAACATCTTCTTCCTGGAGTTATCTTTGTGAGAGATAGGGCTTATGAATGGGTTTCAAAAGAACAAACTTTGCAAGATTTGATTCGTTTTGACGGGCTACCTGAGCATTTAAGGTGA
PROTEIN sequence
Length: 439
MKLKGFSVNGAGNLVLNGVDLVSLSRESERPIYVFNELLIRENLRLYQKALSLFYPKSSSIFYASKAFLNLAMASLIKQEGVGIDVCSGGELFIAQSAKIPSDKILMHGNNKSRRELQAAVEYGVKKIVVDNVEELALLQHITASLKKECSVLLRLNPGLDDIETHKYMVTGAKDSKFGFHVDRTKIAEIINDACSRGYIKFKGLHFHIGSNLQKVSFYEHALDKVFDFVVFLKEKGIEIEELNMGGGLGIAYQDHDPLPDIEKFIKTLSQKVIQLCEDKGIPLPHLMFEPGRSIVGPAGCTLYKIGSIKRGPNKILYAAVNGGMTDNLRPALYQAKHTAVLANRMNEPDSDQPYKIVGNCCETGDILIENIHLPHCVEGDVLVIFSTGAYTHSMVNNYNKHLLPGVIFVRDRAYEWVSKEQTLQDLIRFDGLPEHLR*