ggKbase home page

RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_42_100_rifcsphigho2_12_scaffold_390_3

Organism: Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_42_100

near complete RP 46 / 55 BSCG 48 / 51 ASCG 11 / 38
Location: 3721..4293

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 modulation protein/ribosomal protein S30EA id=4937250 bin=GWC2_Alphaproteobacteria_42_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 378
  • Evalue 5.60e-102
sigma 54 modulation protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 190.0
  • Bit_score: 378
  • Evalue 7.80e-102
sigma 54 modulation protein similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 198.0
  • Bit_score: 162
  • Evalue 1.40e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGCAAGTACAAGTCACAGGTAAAAAAATTGAAGTCAGTGATGCCTTACGAAAACAGGCGCTTGAAAAAATTGAGGCGATTCGTGGAAAGTATCACTTAAGTCCTCTTGAGGCCTCTGTTACCTTTTCGCGTAATGGCCCGATGGTCAGGTGTGACGTAGAAATGCACTTGGGACACAGCGTTTATGTGCGTGCCTATTATGATACGGATGAAGCCTATATTTGCCTCGAACAAGCTATAGAAACCTTTGAAAAAAGGCTTCGTCGCTATAAAAAGAAGTTGATTGATCATACAAAAAAACGAGATGTGGTTTTCAAAAAAGCTCCCGCTTTCCAGTATGTCATTCAAAGTGAAGCTGAAAACGAATCGACAGAGGAGAATCCTCTGATTATCGCTGAAGTGAAAACGGAAATTCCTGAGCTGACTGTTAGTGAGGCTGTAATGCGATTGGATTTGTCGGATTCCCAAGCCCTGCTTTTTAATAATGTAGCTCACGACCAATTGAATGTGGTTTATCGCAGGCCGGACGGAAATATTGGATGGATCTCACCCTCTCAAAATTCAGAAGGATAG
PROTEIN sequence
Length: 191
MQVQVTGKKIEVSDALRKQALEKIEAIRGKYHLSPLEASVTFSRNGPMVRCDVEMHLGHSVYVRAYYDTDEAYICLEQAIETFEKRLRRYKKKLIDHTKKRDVVFKKAPAFQYVIQSEAENESTEENPLIIAEVKTEIPELTVSEAVMRLDLSDSQALLFNNVAHDQLNVVYRRPDGNIGWISPSQNSEG*