ggKbase home page

gwf2_scaffold_3163_10

Organism: GWF2_OD1_43_38_partial

partial RP 34 / 55 MC: 1 BSCG 35 / 51 MC: 4 ASCG 5 / 38
Location: 10346..12085

Top 3 Functional Annotations

Value Algorithm Source
type IV pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB Tax=RIFOXYC2_FULL_RIF_OD1_03_42_11_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 579.0
  • Bit_score: 1121
  • Evalue 0.0
hypothetical protein KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 579.0
  • Bit_score: 453
  • Evalue 9.00e-125
Type IV pilus assembly protein PilB similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 444
  • Evalue 3.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYC2_FULL_RIF_OD1_03_42_11_curated → RIF-OD1-3 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1740
ATGCCTAAGTCAAAACTTAATATTCAGTTACAAGATGTCTTGGTTGCCAAAGGACTCCTAACTGCCGAAAAAGTTCAGGAGCTGGAGCAAGCTGTCGCCACTGATGGGCGGCAGCTTGAGGATATTTTGTTGGAAAGGAATTTGGTCAAGCCAGCAGATATCATGCAGGCCAAAAGCCAGCTGTTCAACATGCCGGTGGCGGATTTGGTGGATAAGGAAATGCCGCGCGAAGTAATACAACTTATTCCGTATGAGCTGGCGGAAAATTACCAACTAGTGGCTTTTGACCGCCAGGCTGATGAAGTTTCAGTGGCTATGGTTAATCCAGGAAATTTTAAGGCGATTGAAGCCATAGAATTTCGAGCACGCGAACAAGGCTGGAAACCTAAGTACTTTATTACCAATACCGACAGCCTTAAAAGCGCGTTTAAATATTACGGCAGTCTTTCCAGTGAAGTTAAGGAAGCCCTGACTTTAGCTGAGGGCAAATTTTCTGAAATTCCGGAATTAGCTGAAGAAGAACAGGGCAAGTTGGAAGAGGTAGTGAAAACAGCGCCGGTGGCCAAAATGGTAGCGGTTATTTTCCGCCATGCCGTGGAAGGTGCTGCCTCCGACATTCACATTGAGCCGGTTCAAGATGAAACGCGCGTGCGCTATCGTATTGACGGCGTGCTGCATACTTCTATTGTGTTGCCGCGTTATATTCATTCCGCGGTAATTAGCCGCATTAAGGTGCTGGCGAACATGAAGATTGATGAAACGCGCGTGCCACAGGACGGTCGTATTCGGCTGACGATCGGCGGTCGGTCGGTTGATTTCCGCGTTTCCACAATGCCATTATTGGGTAGCGAGAAAGTGGTGTTGAGAATTTTGGATACCGCCACGGGATTGAAGAGTTTTGAAGAATTGGGTTTTGCCGGCTCCACTGCCAAACTTATTGATGACAGCTTAAAAAGGACTCAAGGCATGTTCTTGGTTTGCGGCCCAACTGGCAGTGGTAAATCAACCACGCTTTATACCGCCCTGAACAAGCTTAATGACGAAGGTTCCAATATCATTACTTTGGAAGACCCGGTGGAATATTATTTAGAAGGAGTGAACCAATCACAAGTCAATGCCGAAGTTGGCCTGACATTTGCCTCAGGCCTCAGGTCTATTTTGCGCCAAGACCCGGATATTATTATGGTGGGCGAGATTCGCGATATTGAAACAGCTGATTTGGCTATCCATGCTTCTTTGACCGGGCACATTGTGCTTTCAACTTTGCACACCAATGATGCGTTGGGTTCCATTCCACGGTTGGTGGATATGCATGTGGAGCCGTTTTTGTTAGCTTCTACTATTAATGTTGTAGTAGCTCAACGTTTGGTGAGGCGGATATGCCGGTATTGTGTAACCGAGGCTGAGGTACCAGCTGAATTAGTTGATAAAATTAAGAAATCTTTAAGTGAGTTGCCGCCCGGGGGTGATGAGCAAATACCCAAAGGGACTTGGAATTTTAAAAAAGGCCAAGGTTGTGCTCGCTGCAATTTTACTGGCTACAAAGGCCGGGTGGTAATTGCCGAAGCTTTTTCTAACACCCACGAATTGCAGCAAATCATAGTTGCCGGTTTGAATCCAGGGGCTTTGCGAGACGAATTTAAGCGGCAGGGAATGATCACGATGGAACAAGATGGTTTGATTAAGGTGTTACGGGGGGTCACCACCGTGGAAGAAGTATTAAGCGCAACTAACGATTAA
PROTEIN sequence
Length: 580
MPKSKLNIQLQDVLVAKGLLTAEKVQELEQAVATDGRQLEDILLERNLVKPADIMQAKSQLFNMPVADLVDKEMPREVIQLIPYELAENYQLVAFDRQADEVSVAMVNPGNFKAIEAIEFRAREQGWKPKYFITNTDSLKSAFKYYGSLSSEVKEALTLAEGKFSEIPELAEEEQGKLEEVVKTAPVAKMVAVIFRHAVEGAASDIHIEPVQDETRVRYRIDGVLHTSIVLPRYIHSAVISRIKVLANMKIDETRVPQDGRIRLTIGGRSVDFRVSTMPLLGSEKVVLRILDTATGLKSFEELGFAGSTAKLIDDSLKRTQGMFLVCGPTGSGKSTTLYTALNKLNDEGSNIITLEDPVEYYLEGVNQSQVNAEVGLTFASGLRSILRQDPDIIMVGEIRDIETADLAIHASLTGHIVLSTLHTNDALGSIPRLVDMHVEPFLLASTINVVVAQRLVRRICRYCVTEAEVPAELVDKIKKSLSELPPGGDEQIPKGTWNFKKGQGCARCNFTGYKGRVVIAEAFSNTHELQQIIVAGLNPGALRDEFKRQGMITMEQDGLIKVLRGVTTVEEVLSATND*