ggKbase home page

cn_combo_scaffold_8592_2

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(1186..2514)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VAG6_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 453.0
  • Bit_score: 470
  • Evalue 1.50e-129
two component sigma-54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 453.0
  • Bit_score: 470
  • Evalue 4.10e-130
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADU39710.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 453.0
  • Bit_score: 470
  • Evalue 2.10e-129

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1329
ATGGCTCGCATCCTGATTATCGATGACGATGCCAGTTTTCGCGAAAGCCTTGCGGAAACCTTGGCAGGCCTGGGCCACGAATTATTCCTGGCCACTAATGGAGCGCGTGGACTATCGTTCCTGAAGCGTGGCGGTATCGACGCTGTTTTTCTCGATTTTCGCCTGCCTGATATGACAGGCATGGACGTTCTGCGCGCCATCAAGGGGCTACCCGGCGATACGCCACCGGTTGTCATGCTAACCGCCTACACCAGCGTCGATAACACGATAGAGGCGATGAAGCTGGGTGCCTTTGAGCATCTTGCCAAGCCCGTTGGCCGTCAGGCGGTTGAAAATACGCTTGGAGCAGCTTTGGCTTCGAGCAGCAGGACAATACGGCAAAATCCAGTTCCTGGCGAAGGCGAGTTTGTTGCGCGCAGCGAGCGGATGCGGGAAACCCTCAAATTGATCGGGCGTGCGGCAGCAAGCGAGGCCACGGTGCTTATTACCGGTGAAACCGGGAGCGGTAAAGAAATAGTCGCACGTGCTCTGCATCAGCATAGCGCTCGGGCATCGCATCCTTTTGTCGCCATCAATTGTGTGGCAATTCCCCACGAACTACTGGAAAGTGAACTGTTCGGTCACGTCAGGGGGGCTTTTACCGGCGCCGCTGCAGCTCACGCTGGCATCTTCGCCCAGGCGGAGGGAGGCACCTTGCTGCTCGATGAAATCGGTGATATGAGCGTAAACCTGCAAGCCAAGCTCCTGCGGGTGCTCGCAGAGGGAGTGATCGTACCGCTGGGCGCGGAGCATGCGCAGGCAGTAAATGTCCACTTGCTCGCTGCCACTCATCGTGATCTTGGGCAGCAGGTTGCGGAAGGCAGGTTTCGCGAAGATCTGTTTTATCGGCTCAACGTCATCAATATTCATGTACCGCCATTGCGCGAACGGCGCGAGGATATTATTCCGCTGGCCGAGCATTTTCTTGCCATGGCAAGCGATACGCCAAAAGCGCTTTCGCCAGAGGCTCGGCAATATCTTGAAATGCACTCATGGCCAGGCAATGTGAGGGAGCTTCGAAATGTAATCGAACGGGCAATGATTCTTGCCCGAGGCGCTTCGATCGAAGCGGGGGACCTTGGCCTGGTTAAAACCCCTGCTCCTCTCGCGTTACCGGCAGGAGTCCCGCTTATGAGTGACCTTCCTAAAGCGCTGGCCCAGCTTGAGGAGGTGATGATTCGCGCAGCGATTGCCGAAACCGGCGGCAATCGCACAGAGGCCGCGCGGCGGCTGGGCATCCGACGTCAATTGCTCTACGCGAAACTGCGGCAGTACGGAATCGAGCCCTAA
PROTEIN sequence
Length: 443
MARILIIDDDASFRESLAETLAGLGHELFLATNGARGLSFLKRGGIDAVFLDFRLPDMTGMDVLRAIKGLPGDTPPVVMLTAYTSVDNTIEAMKLGAFEHLAKPVGRQAVENTLGAALASSSRTIRQNPVPGEGEFVARSERMRETLKLIGRAAASEATVLITGETGSGKEIVARALHQHSARASHPFVAINCVAIPHELLESELFGHVRGAFTGAAAAHAGIFAQAEGGTLLLDEIGDMSVNLQAKLLRVLAEGVIVPLGAEHAQAVNVHLLAATHRDLGQQVAEGRFREDLFYRLNVINIHVPPLRERREDIIPLAEHFLAMASDTPKALSPEARQYLEMHSWPGNVRELRNVIERAMILARGASIEAGDLGLVKTPAPLALPAGVPLMSDLPKALAQLEEVMIRAAIAETGGNRTEAARRLGIRRQLLYAKLRQYGIEP*