ggKbase home page

cn_combo_scaffold_12814_3

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(3630..4625)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonada similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 323.0
  • Bit_score: 585
  • Evalue 5.60e-164
CRISPR-associated endonuclease Cas1 n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPG8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 323.0
  • Bit_score: 585
  • Evalue 4.00e-164
cas; crispr-associated protein Cas1 similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 325.0
  • Bit_score: 559
  • Evalue 6.60e-157

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGGACGATTTCGGCCCTACCGACCTCAAGTCGATCCTGCATTCCAAGCGCGCCAATATCTACTACCTCCAGCACTGCCGCGTGCTGGTCAACGGCGGTCGGGTCGAATACGTCACCGACGCCGGCAGGCAGTCGCTGTACTGGAACATACCCATCGCCAATACCACCACGGTGCTGCTGGGTACCGGCACTTCGATCACTCAGTCAGCGATGCGCGAGCTGGCCAAAGCTGGTGTCCTGGTCGGCTTCTGCGGTGGCGGCGGCACGCCGCTTTTTTCAGCCAATGAAATCGACGTCGAAGTCGCATGGTTGTCGCCACAAAGCGAGTATCGGCCCACGGAATACCTGCAGGCCTGGGTACGCTTCTGGTTCGACGACGACTTCCGGCTCGCAGCTGCCAAGGCCTTTCAGCACGCCCGCGCGAGACGCATTGCAGATGCGTGGCAACATCGCGCGCTGCGCGACGCGGGCTTCGCCGTGAATCCGGGCCGGCTCACCGAGCTGCTGGCCCGCACCCATCGCCTCATCGACCTTGCGCCTGACAACGCCAGCCTGTTGACTGAAGAGGCTAGGCTGACCAAGGCGCTGTTCAAACTGGCAGTGGATGCCGTGGGCTACGGCGAGTTCACCCGCGCCAAACGCGGTAGCGGCAGCGACCCGGCCAATCGCTTTCTGGATCACGGCAACTACCTGGCCTATGGCCTTGGCGCAACTGCCACCTGGGTGCTGGGCCTGCCGCATGGCTTGGCGGTGTTGCATGGCAAGACGCGCCGCGGTGGACTGGTGTTTGATGTTGCCGACCTTGTCAAGGACGCCACCATCCTGCCGCAGGCATTTCTCTCGGCAATGCGAGGCGACGAGGAGCAGGCCTTCCGCCAGAACTGCATCGAGGCACTAACCCGTAGTGAATCGCTGGACTTCATGATCGACACCTTGAAGGCCGTGGCGCTGGAAACCGCTGCATTGGCTGGCACGGCAAAAAGGGAGCAGGAATGA
PROTEIN sequence
Length: 332
MDDFGPTDLKSILHSKRANIYYLQHCRVLVNGGRVEYVTDAGRQSLYWNIPIANTTTVLLGTGTSITQSAMRELAKAGVLVGFCGGGGTPLFSANEIDVEVAWLSPQSEYRPTEYLQAWVRFWFDDDFRLAAAKAFQHARARRIADAWQHRALRDAGFAVNPGRLTELLARTHRLIDLAPDNASLLTEEARLTKALFKLAVDAVGYGEFTRAKRGSGSDPANRFLDHGNYLAYGLGATATWVLGLPHGLAVLHGKTRRGGLVFDVADLVKDATILPQAFLSAMRGDEEQAFRQNCIEALTRSESLDFMIDTLKAVALETAALAGTAKREQE*