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cn_combo_scaffold_3069_8

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 3952..8076

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 999.99
  • Bit_score: 2494
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 999.99
  • Bit_score: 2494
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Acidovorax sp. (strain JS42) RepID=RPOB_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 999.99
  • Bit_score: 2494
  • Evalue 0.0

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Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4125
ATGGCCCCAACATCCACGTACAGCTATACCGAACGCAAACGCATTCGCAAGAGTTTTGGCACCCGCGACAGCGTGCTCAAGGTGCCTTACTTGCTGCAGATGCAAAAGGATGCCTACACCGCGTTCCTGCAGGCCGATCTGGCTCCGAAAAAGCGCACCAATGAAGGATTGCAGGCTGCCTTCCTTGCCGCCTTCCCCATCGTTTCGCACAACGGCTTCGTGGAGATGAAGTTCGTGGAGTACAACCTGGCCAAGCCCGCGTTTGATGTGCGCGAATGCCAGACGCGTGGCCTGACGTTTGCGTCTGCCGTGCGTGCCAAGGTGCAACTCATCATTTACGACCGCGAGGCCTCCACTTCGCAGAACAAGGTGGTCAAGGAGGTGAAGGAGCAAGAGGTCTACATGGGCGAAGTGCCGCGCATGACCGACAAGGGCTCGTTCATCATCAACGGCACTGAGCGCGTCATCGTCTCGCAGCTGCACCGCTCGCCTGGCGTGTTCTTCGAGCACGACAAGGGCAAGACGCACAGCTCGGGCAAGCTGCTGTTCTCGGCGCGCATCATTCCCTACCGTGGCTCCTGGCTCGATTTTGAATTCGACCCCAAGGACATCCTGTACTTCCGCGTGGACCGTCGCCGCAAGATGCCGGTCACCATCCTGCTCAAGGCCATCGGCCTGAACAACGAGCAGATCCTGGCGCACTTCTTCGTCAACGACAACTTCCGTCTGATGGATTCCGGCGCGCAGATGGAATTCGTCGCCGACCGCATCAAGGGCGAGATCGCGCGTTTTGACGTGACGGACAAATCCGGCAACGTCATCGTTGCCAAGGACAAGCGCATCACCGCGCGCCACACGCGCGAGCTGGAGCAGTCCAAGACGACACACATCAGCGTACCGGAGGATTTCCTCATCGGTCGCGTGCTGGCCCACGATGTGGTGGATGCAGACACGGGTGAGATCGTGGCCAAGGCCAACGAAGAGTTGACCGAGGCGCTGCTCAAGAAGCTGCGCACTGCCCAGGTGCAGGAATTCCCGTGCATCCATACCAACGAGCTGGATCAGGGCCCTTACATCTCGCAGACCTTGCGTGCCGATGAGACGGCGGATGAGTTCGCCGCCCGTGTGGCCATCTACCGCATGATGCGCCCCGGCGAGCCGCCGACCGAAGACGCGGTACAGGCCCTGTTCCAGCGCCTGTTCTACAACCCCGATACCTACGACCTGTCGCGCGTCGGCCGCATGAAGTTCAACGCCAAGGTCGGGCGTGACGAATCGACCGGCCCGATGGTGCTGTCCAACGACGACATTCTGTCGGTGGTCAAAATCCTGGTGGACCTGCGCAACGGCAAGGGCGAGGTCGACGATATCGATCACCTGGGCAACCGCCGCGTGCGCTGCGTGGGCGAGCTGGCAGAAAACCAGTACCGCACCGGCCTGGCGCGTATCGAGAAGGCCGTGAAGGAGCGCCTGGGCCAGGCCGAGCAAGAGCCCCTGATGCCGCACGACCTGATCAACTCCAAGCCGATTTCCGCGGCCCTGAAGGAGTTCTTCGGCGCGTCCCAGCTCTCCCAGTTCATGGATCAGACCAATCCGCTGGCCGAGATCACGCACAAGCGCCGCGTCTCGGCCCTGGGCCCGGGCGGCCTGACGCGCGAGCGTGCCGGCTTTGAAGTGCGCGACGTGCACGTCACGCACTACGGGCGCGTCTGCCCGATCGAGACGCCGGAAGGCCCGAACATCGGTCTTATCAACTCGCTCGCCTTGTACGCGCGTCTGAACGACTACGGCTTCATCGAGACGCCGTACCGCCGGGTGCACGAAGGCAAGGTGACGGATGAAATCGATTACCTCTCGGCCATCGAAGAGGGCAAATACATCATCGCCCAGGCCAATGCGACGCTGGACGACAAGGGGCAGCTCACCGGTGATCTGGTGAGTGCGCGTGAGCAGGGCGAATCGACGCTGGTGTCGGCCGACCGCGTGCAATACATGGACGTGTCGCCGGCGCAGATCGTCTCGGTGGCGGCGTCGCTCGTACCCTTCCTGGAGCACAACGACGCCAACCGCGCGTTGATGGGCGCCAACATGTCGCGCCAGGCCGTACCGGTGCTGCGCCCGCAAAAGCCTCTGGTGGGCACGGGCATCGAGCGCGTGGCCGCCATTGATTCGGGCACCGTGGTGACGGCCGATCGCGGCGGCATCGTCGATTACGTTGACGCCACGCGTATCGTGATTCGCGTGCATGACGACGAGGCAGTGGCTGGTGAAGTGGGCGTGGACATCTACAACCTCATCAAGTACCAGCGCTCCAACCAGAACACCAACATCCACCAGCGCCCCATCGTCAAGAAGGGCGACGTGCTGGCCAAGGGCGACGTCATCGCCGACGGTGCATCCACCGACCTGGGCGAGATCGCGATCGGGCAGAACATGTTGATCGCGTTCATGCCCTGGAACGGCTACAACTTCGAGGACTCGATCCTGATCAGCGAGAAGGTAGTGGCTGACGACCGCTACACCAGCGTGCACATTGAAGAGCTGGTGGTGATGGCACGCGACACCAAGCTCGGCGCCGAGGAAATCACGCGCGACATTCCCAACCTCTCGGAGCAGCAGCTCAACCGTCTGGACGACTCCGGCATCATCTATGTGGGTGCCGAGGTGCTGCCGGGCGATACGCTGGTGGGCAAGGTCACGCCCAAGGGTGAGACCACGCTGACGCCGGAAGAAAAGCTATTGCGCGCGATCTTCGGCGAGAAGGCGAGCGACGTGAAGGACACCTCGCTGCGCGTCGAGCAGGGCTCGCAGGGCACGGTGATCGACGTGCAGGTGTTCACGCGCGAAGGCATCCAGCGCGACAAGCGTGCGCAGCAGATCATCGACGATGAGCTCAAGCGCTACCGCCTGGATTTGAACGACCGCCTGCGCATCGTCGAGGCCGACGCTTTCGATCGTATCGAAAAGCTCATCACGGGCAAGACGGCCAATGGTGGCCCGAACAAGCTCCCCAAGGGCAGCGCGATCGACAGCGCCTATCTCGCGAGCGTCGACCGCCACCACTGGTTCGACATTCGCCTGGCGGACGACACCGTGGCGGCGCAGCTCGAATCGATGAAAAACGCGATGGAGCACACGCGCCACGAATTCGATCTGGCGTTTGAGGAAAAGCGCAAGAAGCTCACCCAGGGCGACGAACTGCCGGCGGGCGTGCTCAAGATGGTCAAGGTCTACCTCGCCGTCAAGCGCCGCCTGCAACCCGGCGACAAGATGGCCGGGCGCCACGGCAACAAGGGCGTGGTCTCCAAGATCGTTCCGGTCGAGGACATGCCCTACATGGAAGACGGCACGCCGGCCGACATCGTGCTCAACCCGCTGGGCGTGCCCTCGCGCATGAACATCGGGCAGGTGCTGGAAGTGCACCTGGGCTGGGCCGCCAAGGGTCTGGGCCAGCGCATTGCCGACATGCTGGAGCGCGAAGCCAAAGCCGCTGAAGTGCGCAAGTTTGTCGAGGAGATCTACAACGCGCGCGGTCACAAGGAGGATCTGGCGCAGTTCGATGACGCGAGCCTGCTGGCGATGGCACAGGAACTGACGCAAGGCGTGCCGTTTGCATCGCCCGTCTTTGATGGCGCATCGGAAGCCGAGATCAAGGACATGCTGCAACTCGCCTACCCGGAAGCCGTGGCCAAGGCCAAGGGTTTGACGCAGCCGCGCACGCAGGCCTTCCTGTACGACGGCCGTACCGGCGAGCGCTTCGAGCGCCCGACGACCATAGGCTACATGCACTACCTCAAGCTGCACCACCTGGTCGACGACAAGATGCACGCACGCTCGACCGGTCCGTACAGCCTGGTCACGCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGCGGCCAGCGCTTCGGCGAGATGGAAGTCTGGGCACTGGAAGCTTATGGCGCTGCCTATGTGCTGCAGGAAATGCTCACCGTCAAGTCCGACGACGTGCAGGGTCGCACCAAGGTCTACGAGAACATCGTCAAGGGCGAGCACTCGATCGAGGCCGGCATGCCCGAATCCTTCAACGTGCTGATCAAGGAGATCCGCTCGTTGGGTCTGGATATCGAAATGGACCGCTCCTGA
PROTEIN sequence
Length: 1375
MAPTSTYSYTERKRIRKSFGTRDSVLKVPYLLQMQKDAYTAFLQADLAPKKRTNEGLQAAFLAAFPIVSHNGFVEMKFVEYNLAKPAFDVRECQTRGLTFASAVRAKVQLIIYDREASTSQNKVVKEVKEQEVYMGEVPRMTDKGSFIINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKAIGLNNEQILAHFFVNDNFRLMDSGAQMEFVADRIKGEIARFDVTDKSGNVIVAKDKRITARHTRELEQSKTTHISVPEDFLIGRVLAHDVVDADTGEIVAKANEELTEALLKKLRTAQVQEFPCIHTNELDQGPYISQTLRADETADEFAARVAIYRMMRPGEPPTEDAVQALFQRLFYNPDTYDLSRVGRMKFNAKVGRDESTGPMVLSNDDILSVVKILVDLRNGKGEVDDIDHLGNRRVRCVGELAENQYRTGLARIEKAVKERLGQAEQEPLMPHDLINSKPISAALKEFFGASQLSQFMDQTNPLAEITHKRRVSALGPGGLTRERAGFEVRDVHVTHYGRVCPIETPEGPNIGLINSLALYARLNDYGFIETPYRRVHEGKVTDEIDYLSAIEEGKYIIAQANATLDDKGQLTGDLVSAREQGESTLVSADRVQYMDVSPAQIVSVAASLVPFLEHNDANRALMGANMSRQAVPVLRPQKPLVGTGIERVAAIDSGTVVTADRGGIVDYVDATRIVIRVHDDEAVAGEVGVDIYNLIKYQRSNQNTNIHQRPIVKKGDVLAKGDVIADGASTDLGEIAIGQNMLIAFMPWNGYNFEDSILISEKVVADDRYTSVHIEELVVMARDTKLGAEEITRDIPNLSEQQLNRLDDSGIIYVGAEVLPGDTLVGKVTPKGETTLTPEEKLLRAIFGEKASDVKDTSLRVEQGSQGTVIDVQVFTREGIQRDKRAQQIIDDELKRYRLDLNDRLRIVEADAFDRIEKLITGKTANGGPNKLPKGSAIDSAYLASVDRHHWFDIRLADDTVAAQLESMKNAMEHTRHEFDLAFEEKRKKLTQGDELPAGVLKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKIVPVEDMPYMEDGTPADIVLNPLGVPSRMNIGQVLEVHLGWAAKGLGQRIADMLEREAKAAEVRKFVEEIYNARGHKEDLAQFDDASLLAMAQELTQGVPFASPVFDGASEAEIKDMLQLAYPEAVAKAKGLTQPRTQAFLYDGRTGERFERPTTIGYMHYLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYVLQEMLTVKSDDVQGRTKVYENIVKGEHSIEAGMPESFNVLIKEIRSLGLDIEMDRS*