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cn_combo_scaffold_3069_9

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 8205..12437

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 999.99
  • Bit_score: 2553
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=2 Tax=Alicycliphilus denitrificans RepID=E8TVM6_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 999.99
  • Bit_score: 2553
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 999.99
  • Bit_score: 2553
  • Evalue 0.0

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4233
ATGAAATCGCTACTCGACCTGTTCAAGCAATTCACGCCCGATGAGCATTTCGACGCCATCAAGATCGGCTTGGCGTCGCCCGAGAAAATTCGTTCCTGGTCCTTCGGTGAGGTCAAGAAACCCGAGACCATCAACTACCGCACCTTCAAGCCCGAGCGCGACGGTCTGTTCTGCGCCAAGATTTTTGGCCCGATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCTTGAAGCACCGCGGCGTGATCTGCGAGAAGTGCGGCGTGGAAGTCACGCAGGCCAAGGTGCGCCGCGAGCGCATGGGCCACATCGACCTGGCCGCGCCCTGCGCCCACATCTGGTTCCTGAAGTCGCTGCCCAGCCGCCTCGGCCTGGTGCTGGACATGACGCTGCGCGACATCGAGCGCGTGCTCTACTTCGAAGCCTACGTGGTCACCGACCCGGGCATGACGCCGCTCAAGAAGGGCAGCATCATGAGCGAGGACGACTACGACGCCAAGGTGGTGGAGTACGGCGACGAGTTCGTCGCCAAGATGGGCGCAGAAGGCATCAAGGATCTGCTGCAAGGCATCGATCTCGAACCCGAGATCGAGCGCCTGCGTGGCGACCTGACCGGCTCGGAAGCCAAGGTCAAGAAGAACACCAAGCGCCTGAAGGTGCTGGAGGCCTTCAAGAAGTCCGGCATCAAGCCCGAGTGGATGATCCTGGAAGTGCTGCCGGTGCTGCCGCCTGACCTGCGCCCGCTGGTGCCGCTCGATGGTGGCCGTTTCGCCACCTCGGACCTGAACGACCTGTACCGCCGCGTCATCAACCGCAACTCGCGCCTGCGCCGCCTGCTCGAATTGAAGGCGCCGGAAATCATCGCGCGCAACGAAAAGCGCATGCTGCAGGAGGCAGTCGACTCGCTGCTCGACAACGGCCGCCGCGGCAAGGCCATGACGGGTGCGAACAAGCGCGCGCTCAAGTCGCTCGCCGACATGATCAAGGGCAAGGGCGGACGCTTCCGCCAGAACCTCTTGGGCAAGCGCGTCGACTATTCGGGCCGCTCAGTGATTACCGTGGGCCCGCAACTCAAGCTGCACCAGTGCGGCCTGCCCAAGCTGATGGCGCTCGAACTCTTCAAGCCCTTCATCTTCTCGCGCCTGGAAGCCATGGGCATCGCGACGACGATCAAGGCGGCGAAGAAAGAGGTCGAGAGCGGCACGCCGGTGGTGTGGGACATCCTCGAAGAGGTGATCCGCGAGCACCCCATCATGCTCAACCGCGCGCCGACGCTGCACCGTCTGGGCATCCAGGCGTTCGAGCCGATGCTGATCGAAGGCAAGGCGATCCAACTGCACCCGCTGGTCTGCGCCGCGTTCAACGCCGACTTTGACGGCGACCAGATGGCCGTGCACGTGCCGCTGTCGGTGGAAGCGCAGCTGGAAGCGCGCACGCTGATGCTGGCGTCCAACAACGTGCTTTTCCCGGCCTCGGGCGAGCCCTCCATCGTGCCCTCGCAGGACGTGGTGCTGGGCCTCTACCATGCCACGCGTGAGCGCGTCAACGGCAAGGGCGAGGGCATGGCCTTCATGGACCTGGCCGAGGTGCAGCGCGCACTGGACGCGGGCGAGGTCGAGATCACCAGCAAGATTCGCGTGCGCCTGACCGAGTGGAACAAGGCCAAGGACAGCGGCGAGTTCGAGCCGCAGGTCAATCTGGTGGAGACCACGGTCGGCCGTGCGCTGCTGTCGGAAATCCTGCCCAAGGGCCTGGCTTTCAGCAACCTGAACAAGGCGCTCAAGAAGAAGGAAATCTCGCGTCTCATCAACGCGTCGTTTCGCAAGTGCGGCCTCAAGGACACCGTGGTGTTCGCCGACAAGCTGCTGCAAAACGGCTTCCGCCTGGCGACGCACGCCGGCATTTCGATCTGCGTCGACGACATGCTGGTGCCGCCGCAAAAGGCCGAGATCATCGGCCGCGCCGAAAAGGAAGTGAAGGAGATCGAGCAGCAGTACGTCTCCGGTCTGGTGACCGCTGGCGAGCGCTACAACAAGGTCGTCGACATCTGGGGCAAGGCCGGTGACGACGTCTCGCGCGTGATGATGGACCAGCTCAAGGTCGAGAAAACGCTGGATCGCCACGGCAAGGAGGTCGATCAGGAGTCGTTCAACTCCATCTACATGATGGCCGACTCGGGCGCCCGCGGCTCGGCAGCGCAGATTCGCCAGCTCGCCGGCATGCGCGGCCTGATGGCCAAGCCCGATGGCTCGATCATCGAGACGCCGATCACGGCCAACTTCCGCGAAGGCCTGAACGTGTTGCAGTACTTCATCTCCACGCACGGCGCGCGCAAGGGCCTGGCGGATACGGCATTGAAGACCGCGAACTCGGGCTACCTCACGCGCCGCCTGGTGGACGTGACGCAGGACCTGGTGGTGACCGAGCAGGACTGCGGCACGCACAACGGCGCGCTGATGCGCGCGGTGGTCGAGGGCGGCGAAGTCATCGAATCGCTGCGCGAGCGCATCCTGGGCCGCGTCGCGGCCGACGACGTGCTGCACCCCGAGAACCACGCGGTGCTGGTCACTGCCGGCACGCTGCTGTCCGAAGACGTGATCGATGGTCTGGAAACCGCCGGCGTGGACGAGGTCAAGGTGCGCACGCCGCTGACCTGCGACACGCGCTACGGCCTGTGCTCCATGTGCTACGGCCGCGACCTGGGCCGCGGCGGCCTGATCAACCTCGGCGAGGCGGTCGGCGTAATCGCTGCCCAGTCCATCGGCGAGCCGGGCACGCAGCTGACCATGCGCACCTTCCACATCGGTGGTGCCGCCTCGCGTGCGGCCGTGGCCTCGGGCGTGGAAGCCAAGAGCAACGGCAACGTCGGCTTCAATACCACCATGCGCTATGTCACCAACTCCAAGGGCGAGCTGGTGGTGATCGCACGCTCCGGTGAAATCGTGATCCACGACGAGCATGGCCGCGAGCGTGAGCGCCACCGCGTGCCCTATGGCGCGACGCTGACCGTCAAGGCCGACCAGCAGATCAAGGCCGGCACGCCGCTGGCGCACTGGGACCCGCTGACGCGCCCCATCATCACCGAGTACGCGGGCCGCGTGAAATTCGAGAACATCGAAGAAGGCCTGACGGTGGCCAAACAGGTGGACGAGGTGACGGGCCTGTCCACGCTGGTGGTGATTGATCCCAAGCGCCGCGGCTCGGCCAAGGTGGTGCGCCCGCTGGTGAAGCTGATCGACGCCTCGGGCAACGAGGTGAAAATCCCCGGCACCGACCATGCGGTGGCCATCGGCTTCCAGGTTGGCGCGCTGATCCAGGTGCGCGACGGCCAGGATGTCGGCCCCGGCGAGGTGCTGGCGCGCATTCCGGTTGAAGGCCAGAAGACGCGCGACATCACGGGTGGTTTGCCGCGCGTGGCCGAGCTGTTCGAAGCCCGGTCTCCGAAAGACAAGGGGATGCTGGCCGAGATGACCGGCACGATCTCCTTCGGCAAGGAAACCAAGGGCAAGGTGCGCCTGCAGATCACCGACCCGGACGGCAAGGTCTGGGACGAGCTGGTGCCCAAGGAAAAGAACATGCTGGTGCACGAAGGCCAGGTGGTGAACAAGGGCGAGCACATCGTCGACGGCCCGGCCGATCCGCAGGACATCCTGCGCCTGCTGGGCATAGAGGAGCTCTCGCGCTACATCGTCGACGAGGTGCAGGACGTCTACCGCCTGCAGGGTGTGAAGATCAACGACAAGCACATCGAGGTCATCGTGCGCCAGATGCTGCGCCGCGTCGTGATCGACAACCCGGGCGAGTCCAGCTACATCCTGGGCGAGCAGGTCGAGCGCTCCGAGGTGCTGAACACCAACGAGGCGCTGCAAAAGGACGGCAAGATCCCGGCCACCTTCACCAACCTGCTGCTGGGCATCACCAAGGCGTCGCTCTCGACCGACTCGTTCATCTCCGCCGCTTCCTTCCAGGAGACGACGCGCGTGCTGACCGAGGCGGCCATCATGGGCAAGCGCGACGAACTGCGCGGCCTGAAGGAAAACGTCATCGTCGGGCGTCTGATTCCTGCCGGTACGGGCCTGGCTTACCACCAGGCGCGCAAGGTCAAGGACGCGATGGACGAGGCCGAGCGCCGCGCGATTGACGAGGCGGAGGCGCAGGAGCTCGCCGCGGGCGCCGATGGCGATGCCGCCGCCGTTGCGCACGAAGGAGACGGCGAAGCAGCGCAGTAA
PROTEIN sequence
Length: 1411
MKSLLDLFKQFTPDEHFDAIKIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQAKVRRERMGHIDLAAPCAHIWFLKSLPSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKGSIMSEDDYDAKVVEYGDEFVAKMGAEGIKDLLQGIDLEPEIERLRGDLTGSEAKVKKNTKRLKVLEAFKKSGIKPEWMILEVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEAVDSLLDNGRRGKAMTGANKRALKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVGPQLKLHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVESGTPVVWDILEEVIREHPIMLNRAPTLHRLGIQAFEPMLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQLEARTLMLASNNVLFPASGEPSIVPSQDVVLGLYHATRERVNGKGEGMAFMDLAEVQRALDAGEVEITSKIRVRLTEWNKAKDSGEFEPQVNLVETTVGRALLSEILPKGLAFSNLNKALKKKEISRLINASFRKCGLKDTVVFADKLLQNGFRLATHAGISICVDDMLVPPQKAEIIGRAEKEVKEIEQQYVSGLVTAGERYNKVVDIWGKAGDDVSRVMMDQLKVEKTLDRHGKEVDQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVTEQDCGTHNGALMRAVVEGGEVIESLRERILGRVAADDVLHPENHAVLVTAGTLLSEDVIDGLETAGVDEVKVRTPLTCDTRYGLCSMCYGRDLGRGGLINLGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASGVEAKSNGNVGFNTTMRYVTNSKGELVVIARSGEIVIHDEHGRERERHRVPYGATLTVKADQQIKAGTPLAHWDPLTRPIITEYAGRVKFENIEEGLTVAKQVDEVTGLSTLVVIDPKRRGSAKVVRPLVKLIDASGNEVKIPGTDHAVAIGFQVGALIQVRDGQDVGPGEVLARIPVEGQKTRDITGGLPRVAELFEARSPKDKGMLAEMTGTISFGKETKGKVRLQITDPDGKVWDELVPKEKNMLVHEGQVVNKGEHIVDGPADPQDILRLLGIEELSRYIVDEVQDVYRLQGVKINDKHIEVIVRQMLRRVVIDNPGESSYILGEQVERSEVLNTNEALQKDGKIPATFTNLLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHQARKVKDAMDEAERRAIDEAEAQELAAGADGDAAAVAHEGDGEAAQ*