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cn_combo_scaffold_12527_6

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 4455..5111

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix-domain containing protein AraC type n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRS1_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 33.6
  • Coverage: 223.0
  • Bit_score: 121
  • Evalue 8.30e-25
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 33.6
  • Coverage: 223.0
  • Bit_score: 121
  • Evalue 2.30e-25
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ABS62604.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 33.6
  • Coverage: 223.0
  • Bit_score: 121
  • Evalue 1.20e-24

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGGACTTCTGGACATTTTCGACGGCGGCATTTCTTCAGAATGACCGCGAGGAAGGTTGGAAGCAGGCACTGAGCAGTGTCGGCATCGGCTATGGCGATGTGACGCCGGGCCCCCATTTTCACGGCATCGTCGCGGCTGTCTCGAGCGCGAGCGAGACCGACTATGTCTATCTGTCGTTGCCGGCGCAGACGCTGACGCATCAGAAGGTCAACCGCGACAAGGCGTTGCTTCTCCTAGTGATCGAGGGCCGGGGCGAATATCGGGCGCCCGGCATGGAGCCGGTCGCGATCATGTCCGGCGACTTTCTGTTCGGCGCGCCCACACATGACTCGGTCTTCCAGTTCGAAGATGACTCCCGCGTGATTATCGTGCGGCTGTCCCGGGCGCTCGTGCTGTCTCGCCTGCTCGCGCCGATCCCCGACGTCCTTCAGCCGATATCCGGTGAAAGCGCCTTAGCGGCGGTGTTCGGTGACATGCTGACCTCGCTCTCATCCAAACTTGACAGCGTGGAACCGGACCAGTTTAAGACCATCGAAACCGCGCTCGCAGAATTCCTCGTCGCCAATTTGCTGGGTGACGGCGATGTGCAGACGCTGGGCGGCATAACGGGGCGGCGGGCCGGCCTCTTGCACCGCATTTCCCAGACGATCGAGTGC
PROTEIN sequence
Length: 219
MDFWTFSTAAFLQNDREEGWKQALSSVGIGYGDVTPGPHFHGIVAAVSSASETDYVYLSLPAQTLTHQKVNRDKALLLLVIEGRGEYRAPGMEPVAIMSGDFLFGAPTHDSVFQFEDDSRVIIVRLSRALVLSRLLAPIPDVLQPISGESALAAVFGDMLTSLSSKLDSVEPDQFKTIETALAEFLVANLLGDGDVQTLGGITGRRAGLLHRISQTIEC