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cn_combo_scaffold_11772_1

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(2..2701)

Top 3 Functional Annotations

Value Algorithm Source
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] id=12498373 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 900.0
  • Bit_score: 1788
  • Evalue 0.0
Formate dehydrogenase subunit alpha {ECO:0000313|EMBL:ERI52606.1}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 900.0
  • Bit_score: 1435
  • Evalue 0.0
formate dehydrogenase, alpha subunit similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 895.0
  • Bit_score: 1430
  • Evalue 0.0

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Taxonomy

Pseudomonas sp. EGD-AK9 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2700
ATGAGCCTGCATTGCCATCACGACCGGGGCACGCCGGCCCGCGTGTCCGCCGAGCGCGTCACCCTCAGCATCGACGGCCTGTCCGTCACCGTGCCGGCCGGTACCTCGATTCTGCACGCCGCCGCCGAGGCGGGGGTCGACATTCCCAAGCTGTGCGCCACCGAATCCCTGGAGGCTTTCGGCTCCTGCCGCCTGTGCGTGGTCCAGGTGAAGAATCGGCGCGGCTACCCGGCCTCGTGCACGACGCTGGCGGAAGAGGGCATGGAAGTCACCACCGAGAACGACGCGCTGTTCCGCCTGCGCCGCGGCGTCATGGAGCTCTACATTTCCGACCACCCGCTCGACTGCCTGACCTGTTCGGCCAACGGCGACTGCGAACTGCAGGACATGGCGGGTCGCGTGGGCCTGCGCGAAGTGCGCTACGCAGAGGGCCACAATCACCTCGCCGAGACGGCCGACGCCTCCAACCCCTATTTCAATTACGACCCGGCCAAGTGCATCGTCTGCTCGCGCTGCGTGCGGGCCTGCGGCGAAGTCCAGGGCACTTTCGCGCTGACGACCACCGAGCGCGGCTTCGACAGCCGCATCGCGGCGGCCGGCGGCGCGGATTTCCTGTCGTCCGAATGCGTGTCCTGCGGCGCCTGCGTGGCGGCCTGCCCGACCGCGGCGCTGATGGAAAAATCGGTGATCGAACTGGGCCAGCCGCAGCGCAGCGTGACCACCACCTGCGCCTACTGCGGCGTGGGCTGCTCGCTGAACGCCGAGATGCAGGGCGAAAAACTCGTCCGCATGGTGCCCGATCCCAACGGCGGCGCGAACCACGGCCATGCCTGCGTCAAGGGCCGCTTCGCCTGGGGCTACGCCACCCACGCCGACCGCATCACGACGCCGATGATCCGCAAGTCGATCCGCGATCCCTGGCAGACCGTGAGCTGGGAGGAGGCGATCGCGCACACGGCCGCCGAATTCCGCCGCCTGCAGGCGCAGCACGGCGCCGAATCCATCGGCGCGATCACCTCGTCGCGCTGCACCAACGAGGAAACCTTCCTCGTGCAGAAGCTCACCCGTGCGGCCTTCGGCGTGAACAACGTCGACACCTGCGCACGCGTCTGCCATTCGCCCACCGGCTACGGTCTCAAGCAGACGCTGGGCGAATCCGCGGGCACGCAGGATTTCGATTCGGTGATGCAGGCCGACGTTATGCTGCTGATCGGCGCGAATCCGACCGACGGCCATCCGGTGTTCGGCTCGCGCATGAAGCAACGGCTGCGCCAGGGGGCGAAGCTGATCGTCGCCGATCCGCGCGCCATCGATCTCGTCGATACGCCGCACGTGCGTGCCGCCCACCATCTGAAACTGAAACCCGGTACGAACGTGGCGCTGATCAACGCGCTGGCGCATGTGGTGGTGAGCGAGGGACTGGTCGACGAAGCTTTCGTCGCCTTGCGCTGCGAACCGGAAGCCTTCGCCAAATGGCGCGCCTTCATCGCCGACCCACGCCATTCGCCCGAGGCGACCGAATCGATCACCGGCGTGCCGGCGGCCGAGATGCGCGCGGCGGCGCGGCTCTACGCGACCACCGGCAACGGCGCGATCTATTACGGCCTGGGCGTCACCGAGCACAGCCAGGGGTCCACCATGGTCATGGGCATCGCCAACCTGGCGATGGCCACCGGCAACATCGGCCGGCCCGGCGTCGGCGTCAATCCGCTGCGCGGCCAGAACAACGTGCAGGGCTCCTGCGACATGGGCTCCTTCCCGCACGAGCTGCCGGGCTATCGGCACGTGTCCGACGTGGAGACGCGCACGCTGTTCGAGTCGATCTGGGGCGTGCCGCTGTCCGACGAGCCGGGCCTGCGCATTCCGAACATGTTCGACGCCGCCATCACCGGCAGCTTCAAGGGCCTGTACGTGCAGGGCGAGGACATCGCGCAGTCCGACCCCAACACGCATCACGTGACCGCCGCGCTGGAGGCGCTCGAATGTCTGGTGGTGCAGGATCTGTTCCTGAACGAAACCGCCAAGTTCGCGCACGTCTTCCTGCCGGGCGCGTCCTTCCTGGAAAAGGACGGTACCTTCACCAACGCGGAGCGCCGCATCTCGCGCGTGCGCAAGGTGATGCGTCCGCTCGCCGGCCACGCCGACTGGGAAGTGACGCAGATGCTGTCCAACGCGCTCGGCTATCCGATGCGCTACGCCCATCCGTCCGAGATCATGGACGAGATCGCGCGCCTCATGCCTACCTTCCACGGCGTCAGCTACGAGAAGCTCGACCGTCTGGGCAGCGTCCAGTGGCCGTGCAACGAGACGCACCCGGAGGGCACGCCCACCATGCACATCGACGAATTCGTGCGCGGCAAGGGGCGCTTCATGCTGACCGAATACGTGGCGACCGAGGAGCGTGTGAACCGGCGCTTCCCGCTGCTGCTCACCACCGGCCGCATCCTCTCGCAGTACAACGTCGGCGCGCAGACGCGGCGGACCGCCAACACCGTCTGGCATCCCGAGGACATCCTCGAACTGCATCCGGTGGATGCGGAAGATCGCGGTATCCGCGAAGGCGACTGGGTCGGCGTGCAAAGCCGTGCCGGCGAGACCGTGTTGCGCGCGAAAATCAGCGAGCGCATGCAGCCGGGTGTGGTCTATACGACCTTCCACTGGCCGGGTTCGGGCGCCAACGTGGTGACCACGGAAAATTCC
PROTEIN sequence
Length: 900
MSLHCHHDRGTPARVSAERVTLSIDGLSVTVPAGTSILHAAAEAGVDIPKLCATESLEAFGSCRLCVVQVKNRRGYPASCTTLAEEGMEVTTENDALFRLRRGVMELYISDHPLDCLTCSANGDCELQDMAGRVGLREVRYAEGHNHLAETADASNPYFNYDPAKCIVCSRCVRACGEVQGTFALTTTERGFDSRIAAAGGADFLSSECVSCGACVAACPTAALMEKSVIELGQPQRSVTTTCAYCGVGCSLNAEMQGEKLVRMVPDPNGGANHGHACVKGRFAWGYATHADRITTPMIRKSIRDPWQTVSWEEAIAHTAAEFRRLQAQHGAESIGAITSSRCTNEETFLVQKLTRAAFGVNNVDTCARVCHSPTGYGLKQTLGESAGTQDFDSVMQADVMLLIGANPTDGHPVFGSRMKQRLRQGAKLIVADPRAIDLVDTPHVRAAHHLKLKPGTNVALINALAHVVVSEGLVDEAFVALRCEPEAFAKWRAFIADPRHSPEATESITGVPAAEMRAAARLYATTGNGAIYYGLGVTEHSQGSTMVMGIANLAMATGNIGRPGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHVSDVETRTLFESIWGVPLSDEPGLRIPNMFDAAITGSFKGLYVQGEDIAQSDPNTHHVTAALEALECLVVQDLFLNETAKFAHVFLPGASFLEKDGTFTNAERRISRVRKVMRPLAGHADWEVTQMLSNALGYPMRYAHPSEIMDEIARLMPTFHGVSYEKLDRLGSVQWPCNETHPEGTPTMHIDEFVRGKGRFMLTEYVATEERVNRRFPLLLTTGRILSQYNVGAQTRRTANTVWHPEDILELHPVDAEDRGIREGDWVGVQSRAGETVLRAKISERMQPGVVYTTFHWPGSGANVVTTENS