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cn_combo_scaffold_4029_3

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 2027..2581

Top 3 Functional Annotations

Value Algorithm Source
Colicin transport component, peptidoglycan-associated outer membrane lipoprotein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R5T6_CUPTR similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 180.0
  • Bit_score: 208
  • Evalue 7.40e-51
OmpA/MotB {ECO:0000313|EMBL:KIF80963.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 181.0
  • Bit_score: 209
  • Evalue 4.70e-51
pal; colicin transport component, peptidoglycan-associated outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 180.0
  • Bit_score: 208
  • Evalue 2.10e-51

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Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGAACCGAACCACCAAGCTCCTGCTCGCGGGCCTGACCGCCGCGCTGCTGTCCGCCTGCGGCTCGAACGTCAAGCTGGAGGACACCCAGCAGACCGCCGCGCCGGTCGAGAGCCGCACCACCGACGGCCAGGCCGGCGGCGCCGACGCCTCGGGCGCCGGCTCGCGCGGCGTGCAGCAGGTCACGCTGGGCGACAAGGATCCGCTGAACGATCCCGCCAGCCCGCTGGCCCGCCGCAGCATCTACTTCGACTTCGACAGCTTCGCGATCCGCGACGAGTACCGCGGCACGATCGACGCCCACGCCCGCTACCTGATCTCGACCCAGGGCCGCCGCGTGCTGATCCAGGGCAACACCGACGAGCGCGGCAGCCGCGAGTACAACCTGGCCCTGGGCCAGAAGCGGGCCGAGGCCGTCCGTCGCGCGCTGGGCGCGCTGGGCGTGCCCGAGAGCCAGATGGAGGCGGTCAGCCTCGGCGAAGAGCGGCCGCGCGCCACCGGTTCCGACGAAGCCTCGTGGGCCGAGAACCGCCGCGCCGACCTGGTGTACCAGTGA
PROTEIN sequence
Length: 185
MNRTTKLLLAGLTAALLSACGSNVKLEDTQQTAAPVESRTTDGQAGGADASGAGSRGVQQVTLGDKDPLNDPASPLARRSIYFDFDSFAIRDEYRGTIDAHARYLISTQGRRVLIQGNTDERGSREYNLALGQKRAEAVRRALGALGVPESQMEAVSLGEERPRATGSDEASWAENRRADLVYQ*