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cn_combo_scaffold_5525_7

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 5791..6618

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudomonas agarici RepID=UPI0002FFFBBF similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 250.0
  • Bit_score: 201
  • Evalue 7.90e-49
PilV similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 248.0
  • Bit_score: 197
  • Evalue 4.20e-48
Type IV B pilus protein {ECO:0000313|EMBL:AFK73075.1}; TaxID=231023 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida similarity UNIPROT
DB: UniProtKB
  • Identity: 40.0
  • Coverage: 275.0
  • Bit_score: 196
  • Evalue 3.60e-47

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Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGAAACCTGCACAGCGCCAATCCGGCTTCATCCTGCTCGAGTTCATCGTGGGCTTGGTGCTGCTCGGTCTTGCCATCGTCTTGATGGGGCAATACTTGTCCGATAGCGCAAGACGCAGTCAGGAGACGGTAGCGGCAACCCAGATGCGGCAACTCGTCGATGCGGCCGAACGCTACATCGCCGACAACAACGTGGCCTTGCGGGCGACCGCGACGGCGAGCACGCCTGCTACCGTGACGGTTGCTGCGCTGCAGACGGCCAAATACTTGCCGCCGAGTTTCGCGGCGTTCAACGTCTACATGCAGGCCTATGAGATCCGCGTGTTGGAGCCGACCACCGGCATCCTGTCGACGCTGGTCGTGACCACCGGCGGCGACATTATCGGCGAGAGCAGCCTTCGGCGCATCGCGCGTCAGGTCGGAACCGTCGGTGGGTTTGTCTCCACCACCGCCACAACGGTCGCGACCGGCGCCTACGGCGGCTGGACCCAGACCCTTGCGGCCTACGGTGCTGCGAATGGTGGCGGCCGCTTGGCGGCCGCGCTGTTCTTCCGCGACGGACAGCAGGTGACCGATTTCCTGTACCGCGCCGCGCTTCCTGGGCATCCCGAGGTCAACACGATGGCTGCGCCGCTCGACATGGGCTACAACAACATCGTCAACGCCGGCAACATCACCACCGGTGGACAGCTGACCGCTGACAGCATCATCGTCGCGCGCACGGTAGTCGTGAACACGACTTGCACGCCGAATGGGTTGCTCGGAAAACAATCCGACGGGCGCATTGCTTCCTGCGTCAATGGCCTTTGGCGCCTTGCTGGAACGTAG
PROTEIN sequence
Length: 276
MKPAQRQSGFILLEFIVGLVLLGLAIVLMGQYLSDSARRSQETVAATQMRQLVDAAERYIADNNVALRATATASTPATVTVAALQTAKYLPPSFAAFNVYMQAYEIRVLEPTTGILSTLVVTTGGDIIGESSLRRIARQVGTVGGFVSTTATTVATGAYGGWTQTLAAYGAANGGGRLAAALFFRDGQQVTDFLYRAALPGHPEVNTMAAPLDMGYNNIVNAGNITTGGQLTADSIIVARTVVVNTTCTPNGLLGKQSDGRIASCVNGLWRLAGT*