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cn_combo_scaffold_6579_3

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(1690..2583)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IDW8_METNO similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 294.0
  • Bit_score: 342
  • Evalue 3.10e-91
LysR family transcriptional regulator {ECO:0000313|EMBL:ETR78739.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 297.0
  • Bit_score: 365
  • Evalue 8.20e-98
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 294.0
  • Bit_score: 341
  • Evalue 2.50e-91

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
GTGGACCTTCGCAAGCTGCGTTATTTCTCCGTCCTCGCCGAGGAGAAGCACTTTGGCCGCGCGGCGCAGCGGTTGTCGCTGTCGCAGCCGCCGCTCAGCCTCGCCATCCGCCAACTCGAAGAGGAGATCGGCGCCCGACTGTTCGAGCGCACCAGCCGCAACGTCAGCCTCACCGCGGCGGGCGTGGCCTTGCAGCGCGAGGCGGAAGTGCTGCTGCGCCGGACCGAGGAAACCCGCCTTCTGGTGAAGGCGATCGCCGACGGAAAGGAAGGGCGGCTGCGGCTCGGCTTCGGCAGCTCGATGCTCTATCGCGGCTTCCCGAAAATTCTCGACGCCTTCCAGGCCGCATCACCCGACATCGAGCTCTCGGTTCAGGAGTTGAACTCGACTGAGCAGATCGAGGCGCTGCAGCGCGACGAGATCGACCTCGGCTTCATCCACGGCCGCGACGTCCCGAGCCGGTTGGAGGGCTTTCGCTATCACGCCGAGCCCTTCGTCGCCTGCGTCCCTCGGGATCACCCTTGCGCCGGCGCCCGCACGCTCCGCCTGTCGCGACTCAAGGACGACGAGTTCGTTCTGTTCTCCCGGAACGTCTCGCCGGATTACTACCAGTCGATCATCGCGACCTGCCTTTCGGCGGGCTTCTCGCCGCACGTCCGCCATCAGGTCCGCCACTGGCTGAGCGTGGTCTCCTTCGTCGCCAACGGCCTTGGCGTGGCGCTCGTTCCGAGCACCCTCAAGGCCTCGGACATGGCCGGCGCGGTCTTCGTGCCGTTACGGGAAGCGAAGATCCTCTCCGAGACCTGGTGTGTCTGGAAAGCCGGCGGGCCGCAGCGCCCCGCGCTCGACGCGCTGATACGGGCCGCGCGGACGCAATCGCAGGCGATGCGTTAG
PROTEIN sequence
Length: 298
VDLRKLRYFSVLAEEKHFGRAAQRLSLSQPPLSLAIRQLEEEIGARLFERTSRNVSLTAAGVALQREAEVLLRRTEETRLLVKAIADGKEGRLRLGFGSSMLYRGFPKILDAFQAASPDIELSVQELNSTEQIEALQRDEIDLGFIHGRDVPSRLEGFRYHAEPFVACVPRDHPCAGARTLRLSRLKDDEFVLFSRNVSPDYYQSIIATCLSAGFSPHVRHQVRHWLSVVSFVANGLGVALVPSTLKASDMAGAVFVPLREAKILSETWCVWKAGGPQRPALDALIRAARTQSQAMR*