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cn_combo_scaffold_7529_5

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(5404..6774)

Top 3 Functional Annotations

Value Algorithm Source
2-methylcitrate dehydratase n=3 Tax=Amycolatopsis mediterranei RepID=D8HNN0_AMYMU similarity UNIREF
DB: UNIREF100
  • Identity: 42.5
  • Coverage: 438.0
  • Bit_score: 335
  • Evalue 9.90e-89
prpD; 2-methylcitrate dehydratase similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 438.0
  • Bit_score: 335
  • Evalue 2.80e-89
2-methylcitrate dehydratase {ECO:0000313|EMBL:AEK42401.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (s similarity UNIPROT
DB: UniProtKB
  • Identity: 42.5
  • Coverage: 438.0
  • Bit_score: 335
  • Evalue 1.40e-88

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Taxonomy

Amycolatopsis mediterranei → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGCGAGCTGAAGCACCTGCGCACGGAGCAACAGAACGCCTTGCGCAGTTCTGCGCGAACTTGAAGTATGCAGACCTGGACGAGGCTGCGCGATACGCGGTCCGGCGACATCTGCTCGACACGATGGGAGCCGCCATAGCGGGTTCGCGAAGCGCGCCCGCCCTGATTGCCGCGCAGGTGCTCGCCAAGCAGGAGGCGGGCGGTCAGATGGTGGTGCCGGGTTTCGAAGGCCGCTGGAGTCGCCTTTCGGCTGCTTATTTGATGGGCGCCAGTGCTCACGGACTGGAACTGGATGATGGTTATCGCGCGGGCTCGGTTCATCCTGGCGCTCCGGTGATTCCCGCGGCGCTTGCCGCAGCCTGGGATGGAAACGTGGATGGCAAGCGCCTGGCTGCTGCCATCGCTGCCGGCTACGAGGTGGTCACGCGTGTCGCGCAGACCGTGCATCCCGCCTCGAGAAAGCGCGGATTCCACAACTCCTCAATCACAGGCGGCCTGGGTGCGGCCGTTGCGTCGGCCTCCGTTCTTGGCCTGGACGCCGGGCGCACTGCTCATGCGCTGGGCATCGCGGCGAGCTCGGCTGCGGGCTTGTTTGCCTTTCTGCATGGCGGCGGTGAGATCAAGCGTCTGCACCCAGGCTTCGCGGCCAGGGAGGGTCTCTTTGCAGCTCTCCTGGCGCGCAGCGGTATGACGGGCCCCGAAGGTGCTCTCGAGATCGAAGATGGCTTCCTCCAGGCGTATGGCGGCGGCGCGGATGCGGGCATCCTGCTGGCAGGATTGGGCGACGGGCTCAATATCACGCGCTGCTACATCAAGCCCTATGCATGTTGTCGACACATCCATCCAGCCCTGGACGCCGTGATTGCGGTTGCCAGAGAAGAAAACGTCAACGCTCAGGACATCGCCGGCATCGAGATTGGCACGTATGCAATCGCCGCGGGCCATGCCAGAGGAGGCTGGATCGACATGCCGGCCGCGCAAATGAATTACCGCTTCTGCGCTGCACTTGCAGCCACAGATGGAATTGTCGGTATTGCCGAGTTCGATGCGCAGCACCTCGAGGACCCGGTGCTTGCTGATCTCGCCGAGCGCGTGAGGGTGACGGTCGACCCAGCCTGCGAGGCGGAGTACCCGAGGCTGCGCTCTGCCAACGTGGTGGTCCTCACGAAGGATGGCAAGCGACACCATCGATATATCGATGAGCCACTTGGATCCGCTCGCCATCCTCTTGGCGACGATGCGTTGATCGAGAAGTTCCAGAGCCTCGCTGGACCCGTCATTGGTAATGCCCAGGCGAACCAGATGTGCGCGGTGATCTGGGCACTCGATGAGATCGACAAGGCGGAAGTCCTTCTGCAGGCAAGCGCATGA
PROTEIN sequence
Length: 457
MRAEAPAHGATERLAQFCANLKYADLDEAARYAVRRHLLDTMGAAIAGSRSAPALIAAQVLAKQEAGGQMVVPGFEGRWSRLSAAYLMGASAHGLELDDGYRAGSVHPGAPVIPAALAAAWDGNVDGKRLAAAIAAGYEVVTRVAQTVHPASRKRGFHNSSITGGLGAAVASASVLGLDAGRTAHALGIAASSAAGLFAFLHGGGEIKRLHPGFAAREGLFAALLARSGMTGPEGALEIEDGFLQAYGGGADAGILLAGLGDGLNITRCYIKPYACCRHIHPALDAVIAVAREENVNAQDIAGIEIGTYAIAAGHARGGWIDMPAAQMNYRFCAALAATDGIVGIAEFDAQHLEDPVLADLAERVRVTVDPACEAEYPRLRSANVVVLTKDGKRHHRYIDEPLGSARHPLGDDALIEKFQSLAGPVIGNAQANQMCAVIWALDEIDKAEVLLQASA*