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cn_combo_scaffold_9102_7

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(4521..5762)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK07_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 414.0
  • Bit_score: 395
  • Evalue 7.30e-107
Type I secretion outer membrane protein, TolC family {ECO:0000313|EMBL:EWS56605.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methyli similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 413.0
  • Bit_score: 413
  • Evalue 4.80e-112
outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 410.0
  • Bit_score: 362
  • Evalue 1.50e-97

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Taxonomy

Methylibium sp. T29 → Methylibium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1242
ATGAAGTCTTGGATCATGATGACCTTGGGGTGGGCGCTGGTGCTGCCGCTGCAGGTGGTTGCGCAGCCCGCCACTCCGTCCGACCTACCTCCTGCCGAACTTGCACGTGCGGCCATCGAGCAGGAGCCTTCCGTGGTGAAAGCCCGGTATGCGCTGGAAGCAGCAGGCCATGCGGGGCGCAGGATCGCTGCATCACCCTACGAGTGGTCTGTAGGAGTCGACGGCCAGAGACGCCGCTACGACACAGGTGGCAATTCCAACGAATGGACCGCCAGGATCGAGCGGCCGATCCGAATTGGCGGCAAAGCCGAACTCGACCAAGGCCTGGGCGACGCTACCGAGCGGATAGCTCGTGTCGAGTTGGCGCAAGCGCGGCATGAAGCGGCGCGTGCATTGGCTGACTTGTGGATCGACTGGCTGGCAACTATCCAAGCGCGAGAACTGGCCAAAGAGCAACTCGGCTTCGCCGAATCGAGCGCGTCAGCAGTCGCCGGGCGCCGCAAGGCCGGCGATGCGTCGCTTCTGGATCTCAACGCTGCGCAAGCGGACGCAGCCGAAGCGCGCCGACAGTTCGATGCCGTGCAGGCACAGGAGGCCAAGGCGATCCTTCGCCTGCGCGCACGTTTTCCGTCCCTGGTGATGGAGCCGCGGTCCTTAAGCGAGCCCGTGGAACTAGACATGGAGGAGGTGCAGTGGCGCGAACGGGTCCTGGCCGAGAGCGAAACGCTGCGGATCATGCAGGAATCGCTGAAGCGGGCCGAACTGACGGCCGATCGGGCACGGGCCGATCGGATTCCTGATCCCACGGTTGGCATTTACACGGCCTCGGAGGCTCGTCGCAGTGAACGCATCGTCGGTGTCAGCGTGAGCATCCCGCTCGGAGGGACCTATCGCAGGGAGACCATGCAAGAGGCGCTCAAGCAGGTAGACGTGACGCGGGCTGAACTGGAGCGCCAGCGCAAGGAAGTCGACCTGGCGATTGCGGAAACCATCAACGATGCCCGCACTGCACTGCGGCGATGGAGGTTGGCCGAGCAGTCCGCACAGATGGCCCGCGAGAACGCCAGGCTCGGCCAGCGTGGCTATGCCCTCGGCGAGGGGGATCTGCAATCGCTGCTGCTGCTACGTCGGCAATCCGTTGATGCTGTCGGCGCATCGCTTTCATCCCGCATCGAAGCGTTGAAGGCGCGCAATCGACTGCTGGTCGATGCCCATTTGATTTGGGGGTTAGCCGATGAGTAA
PROTEIN sequence
Length: 414
MKSWIMMTLGWALVLPLQVVAQPATPSDLPPAELARAAIEQEPSVVKARYALEAAGHAGRRIAASPYEWSVGVDGQRRRYDTGGNSNEWTARIERPIRIGGKAELDQGLGDATERIARVELAQARHEAARALADLWIDWLATIQARELAKEQLGFAESSASAVAGRRKAGDASLLDLNAAQADAAEARRQFDAVQAQEAKAILRLRARFPSLVMEPRSLSEPVELDMEEVQWRERVLAESETLRIMQESLKRAELTADRARADRIPDPTVGIYTASEARRSERIVGVSVSIPLGGTYRRETMQEALKQVDVTRAELERQRKEVDLAIAETINDARTALRRWRLAEQSAQMARENARLGQRGYALGEGDLQSLLLLRRQSVDAVGASLSSRIEALKARNRLLVDAHLIWGLADE*