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cn_combo_scaffold_11039_1

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(1..330)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CQD2_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 99.0
  • Bit_score: 76
  • Evalue 2.60e-11
transcriptional regulator, LysR family Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 38.8
  • Coverage: 103.0
  • Bit_score: 77
  • Evalue 1.70e-11
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 102.0
  • Bit_score: 75
  • Evalue 1.30e-11

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Taxonomy

R_Burkholderiales_69_20 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGACCTCCGGCGACCGCCCCCTCGATCTCCTTCAGTTGCGCGCCGCGCTGGCCGTCCGCGAGACCGGCACGGTGACGCGCGCCGCCGGCAAACTCGGCCTCACCCAGCCCGCGGTCAGCCGGCTGATCGGCGCGCTGGAGACGGAGCTTGGCTTCCTGATCTTCGAGCGGCGGGCCAAGCGCATGGTGCTGTCCGAGCGCGGCCGGCAGTTCCTCGACGAGGGCCAGGCGGCGATGCGCAGCATGGCCCGCCTCGGCGCCGTGGCCGGCGAGCTGCGGCGCGGCAATCACGGCCTTCTGCGCATCGCCGCCATCGCGCCGCTGGCGGTC
PROTEIN sequence
Length: 110
MTSGDRPLDLLQLRAALAVRETGTVTRAAGKLGLTQPAVSRLIGALETELGFLIFERRAKRMVLSERGRQFLDEGQAAMRSMARLGAVAGELRRGNHGLLRIAAIAPLAV