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cn_combo_scaffold_11039_3

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 1940..2941

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002EEBA69 similarity UNIREF
DB: UNIREF100
  • Identity: 38.0
  • Coverage: 313.0
  • Bit_score: 213
  • Evalue 2.40e-52
putative Bug-like extra-cytoplasmic solute receptor, TTT-family Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.7
  • Coverage: 318.0
  • Bit_score: 275
  • Evalue 9.60e-71
Tricarboxylate transport protein TctC similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 323.0
  • Bit_score: 207
  • Evalue 6.40e-51

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Taxonomy

R_Betaproteobacteria_64_14 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGAAGCACACCATGAAGCGCCGCACCTTCGCCTTAGGCAGCCTCGCGGCCGGTCTCGCGCCGGCTCTTGTGACACGCCCGTCGCCCGCGCGCGCCGACAAGTGGCCCGACGGGGCGATCAAGTTCGTCGTCGGCTATGCGCCGGGCGGCACGTCGGACGTGACGGCGCGCGTGCTGGCCGAGGCGGTGTCGAGCCGGCTGGGCGAGCAGGTGATGGTCGAGAACAAGCCGGGGGCGCTTGGCCGCATCGCCATCGACATGGTGGCGCGCGCCAAGCCCGACGGGCAGACCTTCCTGGTCTCGCCGGCCGAGTCGTTCTACCAGCAGGCGCTGGAGCAGAAGAAGGAGATCAAGGCCGGCGATCCGCTGGTGCCGGTGACGATCCTGACCACGCAGTCGCTGGTCCTGGCGGCCAATCCGGCACGCGGCTGGAAGACGCTGGCCGACGTGATCGCGGCGGCCAAGGCCGAGAAGGACGGCCTGTCCTATGCCACGCCGTCGTCGGGCGTGGGCTCCAACACCATCGCCGCCGAGGCGATCTTCCGGCCGAGCGGCGCGAAGGTGATGAACGTGCCGTACAAGGGCGGCGGCCAGGCGGTGCAGGATCTGCTGAGCAACGTCGTGCCGCTCGGCCTGCTGGGCTCGGCGCCGGTCGTGCCCTATATGGGCACGGGCAAGCTCACCCTGCTGGCGGTGACGTCGAAGGACCGCGACCCGCTGCTGCCCGACGTGCCCGGCATGGCCGAGCTGGGCTATGCCGATGTCGACATCTCCCAATGGTTCGCCGTCTTCGCGCCGCCCAAGACGCCGAAGGAGATCGTGGACCGCATGTCGGCCACCCTGCGCGAGTCGCTGACCGACCCGAAGGTGATCAAGCTTCTGGCCAACGCCGCGCTGTCGCCGGTCGGCGGCACGCCCGAGGAGTTCGTCCGCCGCTACGAAAGCGAAGGCGCGAAGTGGCTCAAGGCCGTCCGCGCGCTGACGCAGAAAAATCCGGCCTGA
PROTEIN sequence
Length: 334
MKHTMKRRTFALGSLAAGLAPALVTRPSPARADKWPDGAIKFVVGYAPGGTSDVTARVLAEAVSSRLGEQVMVENKPGALGRIAIDMVARAKPDGQTFLVSPAESFYQQALEQKKEIKAGDPLVPVTILTTQSLVLAANPARGWKTLADVIAAAKAEKDGLSYATPSSGVGSNTIAAEAIFRPSGAKVMNVPYKGGGQAVQDLLSNVVPLGLLGSAPVVPYMGTGKLTLLAVTSKDRDPLLPDVPGMAELGYADVDISQWFAVFAPPKTPKEIVDRMSATLRESLTDPKVIKLLANAALSPVGGTPEEFVRRYESEGAKWLKAVRALTQKNPA*