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cn_combo_scaffold_12178_2

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 263..805

Top 3 Functional Annotations

Value Algorithm Source
G:T/U mismatch-specific DNA glycosylase; K03649 TDG/mug DNA glycosylase family protein [EC:3.2.2.-] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 180.0
  • Bit_score: 290
  • Evalue 1.20e-75
G:T/U mismatch-specific DNA glycosylase n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KYN3_FRAAD similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 171.0
  • Bit_score: 180
  • Evalue 2.10e-42
G:T/U mismatch-specific DNA glycosylase similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 171.0
  • Bit_score: 180
  • Evalue 6.00e-43

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
GTGCCGCGGGCATCAAGCCGCAATAAACAGCTCATTCCCGACCTGCTGGCGCCGGGCCTAGATCTCGTCTTCTGTGGCACGGCGCCCAGCCCCATCTCGTTCAAGGCACGCGCCTACTATGCCAATCCCGGCAACGCCTTCTGGCCGACCCTGTATGCGGTCGGCCTGACGCCCGAGCGCCTGGCCCCGTATCGCTATCCCGAGCTGCTGGGCTTCGGAATCGGTCTCACCGACCTCAACAAGACCGAGGTCGGCTCCGACCATGAGCTGACGCCTGCAGCAATGGACGCCGCGTCGCTGCACGCCAAGCTGCGGCAGTTCCGGCCCGCCGCCATCGCCTTCACCAGCAAGAATGCCGCCGCCCTGGGGCTCGGCGTGAAAGCGCCTCCCTACGGACGACAGCAGACGTTGCTCGAGGGGACCGTCGTGTTCGTCCTCGCTTCGCCGTCGGGGCGGGCGCGCTCCTTCTGGACGCTCGCCCCCTGGCAAGAAGCAGCCGCCTTCGTGGCCGAGCGCCGGAGGCGACGGGAGCGAGCGGCATGA
PROTEIN sequence
Length: 181
VPRASSRNKQLIPDLLAPGLDLVFCGTAPSPISFKARAYYANPGNAFWPTLYAVGLTPERLAPYRYPELLGFGIGLTDLNKTEVGSDHELTPAAMDAASLHAKLRQFRPAAIAFTSKNAAALGLGVKAPPYGRQQTLLEGTVVFVLASPSGRARSFWTLAPWQEAAAFVAERRRRRERAA*