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cn_combo_scaffold_3301_7

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(6125..7957)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family with acetamidase/formamidase activity n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J0T2_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 614.0
  • Bit_score: 766
  • Evalue 2.30e-218
Uncharacterized protein {ECO:0000313|EMBL:KEC80211.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 610.0
  • Bit_score: 846
  • Evalue 1.90e-242
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 614.0
  • Bit_score: 765
  • Evalue 1.50e-218
  • rbh

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Taxonomy

Sinorhizobium americanum → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1833
TTGCGAACGCTCGCCGCCGATATCGAGAATCTGGGCCAGGCCGATCTGGCTGCCGGCGAGATCGCTCTCACCGAACTGGTGGCAAGCGCCTTGCTCGGTGAGGCGAGCGCCCCGCACGGCGGGCTGACCGAGGTGCAGGCGGCGCATTTCCGCAGAGTCTCGGCGGCGATCGGCCGCCAGCTCACCAATGCCGATCTGGGGCTCACCGACATCGCCCGCCAGGAGGGCATGTCGGCGCGCTACCTGCAGCGGCTGTTCGAAGGGCGGGGCGAGAACTTCTCCGATCACGTGCGGCAATTACGGCTGCAGCGATGCAAGGCCGACCTGCTCGACCCCAGCCACGCGCGCGAAAGCGTTGCCGCCATTGGTCAGCGCTGGGGGTTTCGCGACCAGGCGCATTTCAGCCGGGCCTTCAGCACGGCTTTCCGGGTGACCCCAAGCGAGATGCGCCGCGCCGCGGCGCCAGTCGAGGACGGCTACTCGCTGCGGGGCAGGCCGACGACGCACCAGCCTGTGCCGCCTGCGAAGACTCCGCCGGCCGGCCCGCCGTTGGCAGCCAGGCCCGAGCCGGAGTTGCGGCCTGGCGACAGGCATCATCTGCCGGCGACCGCCGACACTGTCCACTGGGGCTATGTGAGTCGTACGCTCCCGCCGGTTCTGCGGGTTGAGCCGGGGGCAACCGTCACCATCGAAACGCTCACCCAGCACTCGGCCGACGACTGGGACCGGATGGTGGCGGGAGACGCTGGCGTCGAGAGCGTGTTCGGCTGGACGGCCGAGCGCAAGAACGTCGACCGGCGCGGGGCCGGACCGATGAACGCCTCGGTGTTCGGGCGCGGCGCTGGCGAAGGGTTCGGGGTACATATCTGCACCGGCCCCATTTATGTCCGCGGGGCGGAACCCGGCGATGTGATCGAGGTTGAGATCATCGACATCCGGCCCCGGCCCAGCCGCAATCCGCTGTACGCCGGCAAGGCCTTCGCCTCGAACGCCTCGGCCTGGTGGGGCTACCAGTATGGCGATCTGCTCGACCGGGCGAAGCGCGAGACGGTGACGATCTTCGAGATCGACCTCGAGCGACCAGAAGAGGCCCGCCCGCTCTACAGCTACGTGTGGCAGCCGCAGGTCGATCCGTTCGGCGTTGTGCACAAGACCATGGATTATCCGGGTGTGCGGGTCGACCACACCCTCGTCGAGCATCGCGCCGTGCTCGACGGGGTCGCCATTCCGGCACGCCTGCATTTCGGCTTCGTGGCGCTGGCGCCGCGGGAGTCCGAGCTCGTCGATTCCATCCCGCCGAGCTATTTCGGCGGCAACGTCGACAATTGGCGGGCCGGCAAGGGCGCACGGATTTACCTGCCGGTATCGGTCGAGGGCGGCCTGCTCTCGATGGGCGACGGACATTTCGCCCTGTCCGACGGCGAGATCAACGGCACCGGGCTCGAATGCTCGCTGACCGGCGACATCCGCATCCGCCTCCACAAGGCTGGAGCCGCCGACGCCGCGGCCTGCGTCACCGGACTCAAGGCGCCGTTGATCGAGACCCCCGACAGCTGGGTGATCCAGGGTTTCAGCCACCTCAACTACCTGCGCGATCTCGGTCGCAATGCCCAGGCCGAGGTCTATCGGAAGTCGACCGTGGACCTGGCGCTGCGCAACGCCTTCCGGCAGACGCGCCGGTTCCTGATGGACGTCTATGGACTGAACGAAGACGAGGCGCTGACCATCATGTCACTGGCGGTCGATTTCGGCGTGACGCAGGTCGCGGATGGCAATTTCGGCGTCCACGCGGTTATCGACAAGGCGATCTTCCGCGCCCGCAGCATGCGCTAG
PROTEIN sequence
Length: 611
LRTLAADIENLGQADLAAGEIALTELVASALLGEASAPHGGLTEVQAAHFRRVSAAIGRQLTNADLGLTDIARQEGMSARYLQRLFEGRGENFSDHVRQLRLQRCKADLLDPSHARESVAAIGQRWGFRDQAHFSRAFSTAFRVTPSEMRRAAAPVEDGYSLRGRPTTHQPVPPAKTPPAGPPLAARPEPELRPGDRHHLPATADTVHWGYVSRTLPPVLRVEPGATVTIETLTQHSADDWDRMVAGDAGVESVFGWTAERKNVDRRGAGPMNASVFGRGAGEGFGVHICTGPIYVRGAEPGDVIEVEIIDIRPRPSRNPLYAGKAFASNASAWWGYQYGDLLDRAKRETVTIFEIDLERPEEARPLYSYVWQPQVDPFGVVHKTMDYPGVRVDHTLVEHRAVLDGVAIPARLHFGFVALAPRESELVDSIPPSYFGGNVDNWRAGKGARIYLPVSVEGGLLSMGDGHFALSDGEINGTGLECSLTGDIRIRLHKAGAADAAACVTGLKAPLIETPDSWVIQGFSHLNYLRDLGRNAQAEVYRKSTVDLALRNAFRQTRRFLMDVYGLNEDEALTIMSLAVDFGVTQVADGNFGVHAVIDKAIFRARSMR*