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cn_combo_scaffold_3765_11

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(6865..8256)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MWQ1_CORCM similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 460.0
  • Bit_score: 493
  • Evalue 2.90e-136
sigma-54 dependent DNA-binding response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 450.0
  • Bit_score: 497
  • Evalue 2.80e-137
zraR; sigma-54 dependent DNA-binding response regulator similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 460.0
  • Bit_score: 493
  • Evalue 8.20e-137

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1392
ATGAGCCCGACACCTGCGGCTGAGGCTGGTGGTGCGCGGATCCTTGTAGCGGACGATGACTCCGCGATCCGAGACGCGCTAAGACTTCTGCTCAAGACAGAAGGGTACGACGTCCTGACAGTCGCGTCCACAGCCGAAACCAGTGCGGTGGTCGAGGCTCGGACGTTCGATCTGGCCCTAATCGACCTTAACTTCACATCCGGTAGTACCGCGGGTGGCGACGGCCTCGAACTCCTCGATCGGATCGCTACCATCGACCCGACCCTTCCGGTCGTCGTCATGACAGCTTGGAGTACCGTGTCGGGAGCGGTGGAAGCCATGCGGTTGGGTGCTCGCGACTATGTCGAGAAGCCGTGGGACGATCGCCGATTGCTGGCGTCGATTCAGGGGCAACTGGATCTGCGGCGTGCCCTCCTGTCCAACCGGCGCTTGGAAGAAGCCAATCACCGCCTGCACGAGCGAAACCTCCCAGAGTTCATCGCGGACTCTGAGACCATGCGCCCGGTCATCGACACTTTGCGGCGCGTGGCTCCCTCCGACGCGTCCGTCCTGATTACCGGCGAGCACGGGACCGGCAAGGAAGTTGTCGCCGGCCTGGTGCACCAACTGTCGAGTCGACGAGCGAAACCCTTTGTGACCATGAACGCCGGCGGCCTTTCGCCCGGACTCGCGGAGTCCGAGCTGTTCGGTCACGTTCGGGGAGCGTTTACGGACGCTCGCGCCGACCGCATTGGGTGCTTCGAGCTTGCTGACGACGGCACGCTGTTCCTCGACGAGATCGCCAATATGTCGATCGACCTGCAGCCGAAGCTCCTTCGTGTCCTGCAAACGGGAGAGGTCAAGCGCCTAGGTTCAACTCGCACCGCGCACGTGAACGTTCGCGTGGTCGCTGCAACGAATGCAGACATTCGGGCGGATATCGAGCGCGGCGCCTTCCGGGAGGATCTCCTCTATCGGCTCAACACGATCGCAATCGAGCTGCCGCCGCTTCGACACCGGCGCGAAGACGTCTTGCCATTGGCCGAGATGTACCTGCGGAAGTACACACAGAAGTATGGCCGGAGTGCTGCTGGCTTCGACCGCGGCGCGGTGTCTGCAATGCTCGAACACGATTGGCCCGGCAACGTACGTGAGTTGTCGCATGCCGTGGAGCGCGCGGTATTGATGACAATTGGCCCATCAGTCTCGGCGTCTAGCCTTGCCTTGTCGCGCCGTCCCGAACCTGCTTCCGCGCAGGGGATGGCGCTGGAAAAACTCACCCTTGAGGATGCCGAACGAGCGATCATCGACAAGGTAGTGGCGCGCTACAGCGGAGACATCCGTAAGGCTGCCGCCCAGCTCGGCCTGAGCCGCAGCGCACTCTATCGCAGGCTGCAGCGCCCACGACCATGA
PROTEIN sequence
Length: 464
MSPTPAAEAGGARILVADDDSAIRDALRLLLKTEGYDVLTVASTAETSAVVEARTFDLALIDLNFTSGSTAGGDGLELLDRIATIDPTLPVVVMTAWSTVSGAVEAMRLGARDYVEKPWDDRRLLASIQGQLDLRRALLSNRRLEEANHRLHERNLPEFIADSETMRPVIDTLRRVAPSDASVLITGEHGTGKEVVAGLVHQLSSRRAKPFVTMNAGGLSPGLAESELFGHVRGAFTDARADRIGCFELADDGTLFLDEIANMSIDLQPKLLRVLQTGEVKRLGSTRTAHVNVRVVAATNADIRADIERGAFREDLLYRLNTIAIELPPLRHRREDVLPLAEMYLRKYTQKYGRSAAGFDRGAVSAMLEHDWPGNVRELSHAVERAVLMTIGPSVSASSLALSRRPEPASAQGMALEKLTLEDAERAIIDKVVARYSGDIRKAAAQLGLSRSALYRRLQRPRP*