ggKbase home page

cn_combo_scaffold_4984_9

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(10993..11997)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix type 11 domain-containing protein id=12496799 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 330.0
  • Bit_score: 542
  • Evalue 3.90e-151
predicted transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 331.0
  • Bit_score: 519
  • Evalue 5.90e-145
Predicted transcriptional regulator {ECO:0000313|EMBL:BAO81056.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacter similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 331.0
  • Bit_score: 519
  • Evalue 2.90e-144

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Comamonadaceae bacterium A1 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
TTGAGCAGACTCGACGAACTCTATCGCCTGCACCGCCTGCTTGACGGGCGACGCACTGGCCTCTCGCGTGCCGACCTGATCGGTACGTACAGCTTCGCGCGTTCCACCCTTGCCCGTCTGATCCGTGATCTGCGGGACAAGCTCGGCGCACCGCTGGATCACGACGCCGAGCGCGGCGGCTATTTCTACAACACCGCCAACGGCCGTTTCGACCTGCCCGGCCTGTGGTTCACCGCCGACGAACTGCTTGCGCTCGTCACCCTGAAACACCTGCTCGACCATCTGGAACCCGGCCTGCTCGACGGCCACCTGCGCCCCCTGCAAGCTCGCATCGACCAGCTGCTCGCCAGCCGCCACCTGGGTGCCGGCGAAGCCGGCCGCATCCGCCTGCTGCGCATGGCCGGACGCCACAAAAACCTGCACCATTTCCAGATTGTCGCCGGGGCCGTGTTGCAGCGGAAACGACTCGTCATCGACTATTACAACCGCGAACGCGACGAAACCGACCGGCGCGAAATTTCCCCGCAACGCCTCGCCCACTACCGCGACAACTGGTACCTCGACGCCTGGTGTCACCAGAAGAAAACCCTGCGCATCTTCGCCGTCGAATGCATCCGCAGCGTCGGGCCTCTGACCAGGGTGGCCAAGAGCGTTGCCGAATCCACCCTCAACAGAGAACTCGCCAGCGCCTACGGCATCTTTGGCGGCACCCCCAAAGCCGTCGCCGTCCTCGTCTTCACCGCCCATCGCGCCCGCTGGGTGGCCGATGAAACCTGGCACCCCGAGCAGAAAAGCCGCTGGCTGGACAATGGCCGCTACGAACTGCGCGTGCCCTATTCCGACGCGCGCGAACTGGCCATGGACATCATGAAATACGGGGCGGATGTGGAAGTGATGGCGCCGGCCGAACTGCGGGCACAGGTGAAAGAACGGCTAGAAGCGGCGGCAGGGCAGTATCGGCGCGGGAATCCGGCGGGCCCGGGTTTTGGGCCTGAAGAAGGATAA
PROTEIN sequence
Length: 335
LSRLDELYRLHRLLDGRRTGLSRADLIGTYSFARSTLARLIRDLRDKLGAPLDHDAERGGYFYNTANGRFDLPGLWFTADELLALVTLKHLLDHLEPGLLDGHLRPLQARIDQLLASRHLGAGEAGRIRLLRMAGRHKNLHHFQIVAGAVLQRKRLVIDYYNRERDETDRREISPQRLAHYRDNWYLDAWCHQKKTLRIFAVECIRSVGPLTRVAKSVAESTLNRELASAYGIFGGTPKAVAVLVFTAHRARWVADETWHPEQKSRWLDNGRYELRVPYSDARELAMDIMKYGADVEVMAPAELRAQVKERLEAAAGQYRRGNPAGPGFGPEEG*