ggKbase home page

cn_combo_scaffold_5618_3

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(1074..1391)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, HTH-XRE family n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4S6_AZOL4 similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 70.0
  • Bit_score: 64
  • Evalue 7.60e-08
Transcriptional regulator {ECO:0000313|EMBL:KJR66892.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum similarity UNIPROT
DB: UniProtKB
  • Identity: 40.7
  • Coverage: 81.0
  • Bit_score: 65
  • Evalue 6.20e-08
putative transcriptional regulator, HTH-XRE family similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 70.0
  • Bit_score: 64
  • Evalue 2.10e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Azospirillum thiophilum → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGATCGCCGGGCATATCCGGCGCGGCCGTACGTCCTCCGGTCTCTGCGAGGCGGACTGTGCCGAAAAGATCGGAGTGTCCCTCCAGCAGTTCGAACGCTATGAGCAGGGCACGGAGCGGGTTCCGGCATCACGCCTCATGCTGTTGGCAAAGGTACTCGGCGTACCTGTCAGCGCCTTCTTTGAAAGGCCGATGGTAAGCCCCGATGCGCTTAGAGGGTGCAAGATTGTCCCCATGATGCCAGCGCTTAGACGTAAGGCATCGCACGCCGAATGGGAGGCGAACCTCCTGCGCGGTTTCGGCACGATAAAAACTTGA
PROTEIN sequence
Length: 106
MIAGHIRRGRTSSGLCEADCAEKIGVSLQQFERYEQGTERVPASRLMLLAKVLGVPVSAFFERPMVSPDALRGCKIVPMMPALRRKASHAEWEANLLRGFGTIKT*