ggKbase home page

cn_combo_scaffold_5982_5

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(1520..2632)

Top 3 Functional Annotations

Value Algorithm Source
Putative transposase y4qE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDB6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 367.0
  • Bit_score: 586
  • Evalue 2.60e-164
Transposase {ECO:0000313|EMBL:EYR77596.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 367.0
  • Bit_score: 586
  • Evalue 3.70e-164
Putative transposase similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 370.0
  • Bit_score: 575
  • Evalue 1.00e-161

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1113
ATGGACAAGACCTTCTACATCGGCCTTGATGTTCACAAGGCGAGTATTTCGGTGACGGTCGCCGAAGCCGGCCGCGATGGCGCAGTCCGCTTCCTTGGGGCTATTCCAAACACGCCGACCGATATTGCCAAGCTTGCACGGGGATTAGGCAAGGACGGTCACCGACTGGAGTTCTGCTATGAAGCAGGTGCCTGCGGCTATGGCATCTACCGCCAACTTGTTGGCCTCGGTCACGGTTGCCTGGTGGCCGCGCCGACGCTGATCGCACGCAAGGCTGGGGATCGGGTAAAGACGGATCGGCGGGATTCTGAGAAGCTCGCATTGCAGCACCGGTTTGGCGACCTGACGGCGGTCTGGGTTCCGGATCCTGTCCACGAGGCCATTCGCGATCTTGTTCGCGCCCGCATGGATGCCGTTATGCAGTTGATGCGGGCACGGCAGCAATGCCTTGCCTTCCTACTGCGACACGGTCGGATCTACGGCCCGAACCGCAAGAACTGGACGCTCATGCACCGGCGCTGGCTGGCAGGTCAGACCTTCGAGCAGACTGCGCATCAGATCGTCTTTCAGGATTATGTCGAAGCGGTATGGGCGGCACAGAACCGACGTGACCAGCTTGAGGCGCGCATCACATCGATGTTGCCGGACTGGTCAATGGCATCACTGGTGGACGCCTTGCGCGCTATGCGCGGTGTCGATCTAATCACGTCGGTCGCGTTCGTTGCGGCGGTTGGCGATATCACGCGGTTTGAGTCTCCGCGGCAGCTCATGGCCTATCTCGGCCTGGTGCCGTCGGAGCAGTCAAGCGGTGGTCGAATTAGGCGTGCAGGGATCACCAAGGCAGGTAATGGTGAGGCACGGCGCATGCTGATTGAGGCAGCGTGGAGCTATCGTTATCAGCCGCGGGTCTCGCAGGGTAAGACCGACATTGTCGTGCGTCAGCCCAAGGCGGTGCGCGATATCGCATGGAAAGCGCAGGTGCGCTTGTGCGAGCGCTACCGCAAGCTCAGCGCCGCTGGTAAGAAGCAGACTGTGGTCGTGGCCGCCATCGCGCGCGAGCTTTGCGGCTTCATCTGGGCGATAGGCAAGGCGATGGTTCCGGCTCCGCCATAG
PROTEIN sequence
Length: 371
MDKTFYIGLDVHKASISVTVAEAGRDGAVRFLGAIPNTPTDIAKLARGLGKDGHRLEFCYEAGACGYGIYRQLVGLGHGCLVAAPTLIARKAGDRVKTDRRDSEKLALQHRFGDLTAVWVPDPVHEAIRDLVRARMDAVMQLMRARQQCLAFLLRHGRIYGPNRKNWTLMHRRWLAGQTFEQTAHQIVFQDYVEAVWAAQNRRDQLEARITSMLPDWSMASLVDALRAMRGVDLITSVAFVAAVGDITRFESPRQLMAYLGLVPSEQSSGGRIRRAGITKAGNGEARRMLIEAAWSYRYQPRVSQGKTDIVVRQPKAVRDIAWKAQVRLCERYRKLSAAGKKQTVVVAAIARELCGFIWAIGKAMVPAPP*