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cn_combo_scaffold_8880_4

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(1419..1784)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D8CF74 similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 125.0
  • Bit_score: 143
  • Evalue 1.50e-31
DNA-binding protein {ECO:0000313|EMBL:AHY60382.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 127.0
  • Bit_score: 140
  • Evalue 1.70e-30
nucleoid protein H-NS similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 126.0
  • Bit_score: 134
  • Evalue 1.50e-29

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGAGCATTGATCTGAGTGGCCTTTCGGCCAAGGAACTTTCTTCCCTTATCCGCGACGCGCAGAAGCGCAAGACCGTCGTTGCCAAGCGCCCGCCGGCATCCGCGGTGCGGGCGCAATTGACCAAGGCTGCGGAAAAGGCGGGCTATACCATCCCCGAGCTGTTTGGCCACGGCGTCGGCGGTGGCCAGGCGCGCGGCCATGGCTCCAAGGCCAGCAAGCCGGCGAAAAAGGGCGCCGTCGCTCCGAAGTACCGCGATACCGGCGACGCAGCGAATACTTGGACCGGCCGTGGCAAGCATCCGCGCTGGTTGGCTGCGCACTTGGCCGCCGGCCGGAAGATCGAAGAATTTGCCATCAAAGAGTGA
PROTEIN sequence
Length: 122
MSIDLSGLSAKELSSLIRDAQKRKTVVAKRPPASAVRAQLTKAAEKAGYTIPELFGHGVGGGQARGHGSKASKPAKKGAVAPKYRDTGDAANTWTGRGKHPRWLAAHLAAGRKIEEFAIKE*