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cn_combo_scaffold_11329_3

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(1897..2913)

Top 3 Functional Annotations

Value Algorithm Source
D-ribose transporter subunit RbsB {ECO:0000313|EMBL:EWY41571.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skerm similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 338.0
  • Bit_score: 357
  • Evalue 2.50e-95
Ribose ABC transporter, periplasmic ribose-binding protein id=2177763 bin=GWB2_Clostridiales_37_7 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 34.4
  • Coverage: 276.0
  • Bit_score: 176
  • Evalue 5.70e-41
periplasmic binding protein/LacI transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 324.0
  • Bit_score: 175
  • Evalue 2.80e-41

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Taxonomy

Skermanella stibiiresistens → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGGAAAAAAAGAACGGGATTATTGCGCCGACACGTCGCGGCATTCTGAGAAGTGGCGCTTCACTGGCCGGATTGTCTCTGATCGCGTCGCCTCTCGTGGTGCGATCGAGTTACGCGCAGACCAAGCTCGCCGGCAAGAAAATCGGTTACTCGATGAGCTTCTCGACGATCGAGTGGCTTGTCGCGCAACGCCGTGGCGTGACTGAAACGGCAGCGCGATTTGGCTTCGATCTCACGGTGGCCGATGCAGCCGACAAGCCCACGAAGCAGGTGCAGGATCTCGAGGATCTGGTCACCCGCCGAATGGACCTCATCATCGTCTCAACCTACTACGCCGAGGCCATCACGCCGGCGATCAAGGAGATCAACAAGGCAGGTATTCCGCTTGTTGTTCTCTCGTCGTCGTTGGCTGGCGATTCCGACTGGACCTGCCGTCTGGCAGCGGACAATCTCGGCACCGCGCGTAGCGCCGGCAAATACTATGTCGACAAGCTCGGGAAATCCGCGAAGGTCGTTCAGATCGAAGGGAAGACCGGCTCGGTCGTGAACCAGGAGCGCAGCAAGGGCTGGCGCGAAGAGATCGAGAAGGCCGGTGTCCAGATCGTCGGCCATGCGGTTGCGAACTACGAGCGCTCGCAGGCCTTGCGGAAGATGGAGGACTTCCTCCAGGCCCAACGCCAGATCAACGGCGTGTACTGCAACAACGACGATATGGCGCTTGGTGCGCTTCAGGCAGCGAAGGAAGCCGGTCGCAGCAAAGGCATGATGATCACGGGGTATGACGGCATCCAGCCGCAAGTCATGGCTGCGATTCATGCCGGCGATCTCCATGGCACCTGGCAATACACGCCCATGGGCGTGGAGGGCGTCGAGGTCGCCGCCAAGATTCTGCAAGGCGAGAAGGTGCCGAAGGAAATCCTGTTCCAGTCGCCGCTGATCACCAAAGAAAACGTCACTGAAATCTGGGATCCGTCGACTAACCAGATGAAGCCGTTCAAGTCACAACTGAATCTCTGA
PROTEIN sequence
Length: 339
MEKKNGIIAPTRRGILRSGASLAGLSLIASPLVVRSSYAQTKLAGKKIGYSMSFSTIEWLVAQRRGVTETAARFGFDLTVADAADKPTKQVQDLEDLVTRRMDLIIVSTYYAEAITPAIKEINKAGIPLVVLSSSLAGDSDWTCRLAADNLGTARSAGKYYVDKLGKSAKVVQIEGKTGSVVNQERSKGWREEIEKAGVQIVGHAVANYERSQALRKMEDFLQAQRQINGVYCNNDDMALGALQAAKEAGRSKGMMITGYDGIQPQVMAAIHAGDLHGTWQYTPMGVEGVEVAAKILQGEKVPKEILFQSPLITKENVTEIWDPSTNQMKPFKSQLNL*