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cn_combo_scaffold_11815_8

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(3364..3579)

Top 3 Functional Annotations

Value Algorithm Source
Major cold shock protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J5N8_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 67.0
  • Bit_score: 113
  • Evalue 7.40e-23
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 67.0
  • Bit_score: 114
  • Evalue 4.60e-23
cspA; cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 67.0
  • Bit_score: 113
  • Evalue 2.10e-23

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 216
ATGACGACGGGAACCGTGAAGTGGTTCAATTCCCAAAAAGGCTTCGGCTTCATCCAGCCGGACCAGGGCGGCGCCGATAACTTCGTGCACATCAGTGCCGTCGAGCGGTCGAACCTTGGCATGTTGAGCGAAGGCCAGAAGATTAGCTACGATTTGGTCGCCGACCACCGCAGCGGCAAGATGTCGGCCGACAACCTTCGCGAAGCTGAAGGCTGA
PROTEIN sequence
Length: 72
MTTGTVKWFNSQKGFGFIQPDQGGADNFVHISAVERSNLGMLSEGQKISYDLVADHRSGKMSADNLREAEG*