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cn_combo_scaffold_12283_2

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(400..2574)

Top 3 Functional Annotations

Value Algorithm Source
HAMP domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZV2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 38.5
  • Coverage: 704.0
  • Bit_score: 498
  • Evalue 1.40e-137
DNA, contig: SP607 {ECO:0000313|EMBL:GAN12362.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim similarity UNIPROT
DB: UniProtKB
  • Identity: 38.5
  • Coverage: 704.0
  • Bit_score: 498
  • Evalue 2.00e-137
methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 702.0
  • Bit_score: 361
  • Evalue 5.80e-97

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2175
ATGCGCGAAAGTGTGACTTTATCTGGGCGGATGAGCCTAGCGGTATCCGTCAGAATTGCGGTGATGCTAGTGGTATTGTCCGCCACGATTGCAATTGTCTTCGAGATTTCGACAAGACGACAAGCTGAGGAAATCGGGCATATCACGGCCACCGAAGCGGCAGCCAAGGTGAGTGCGTCCCTCGAGAGAGTCATTGGGGTTGCGAGCGGCATGCGCTCGTCGCTTGCGGCTGCAAAGGCGAAAGGGAATGCGGACCGTTCGCTGCATAATGCGATCCTGCGCGGCACACTTGCCGAAAACCCACAATTGCTGGCGACATGGACCGCGTGGGAACCTGATGCTTTTGATGGCCTGGATAGCCGTTTCGCAAACAGCGTGGGTAATGATGCCAGTGGAAGGTTCGTGCCCTATTGGTTCCGCGAAGATCAAGCCATCAAGGTCACTGCGCTCGTGGATTATGATGAGCCGGGTGCCGGAGATTATTATCTGATGGCCATCGAGCGACAGCAACCCGTTCTGCTTGACCCCTATGATTATCCAGTCGGCGAAGACACTTTGCTAATTACCACAGTATCGTTGCCAATCCTCGAGCAGGGTCGCAGCGTGGGTGTGGCTGGAGTTGATCTTTCGCTTGCCGAGCTGCAATCTGAACTGGGGGCAATGGTTATTCCCTTTGGCGGACAATTGACGCTTTTGTCGGCACAGCGGACTGTTGTGTTTCACCCTGACGCCGAGAAACTAGGTAAGCCCGGTTTGCCTAAGGTGGAAGGGATCGCTTTTGTCGATGACCCTGATCTCGGGTCTATCATGAGGATCGAGAAGAACGTTGCTTTGGTCGGCATACCCGATCTCTGGACCGTTCAGATCGACTTGCCGATGGCAGCCATTTTGCGAACCACACGACTTGTGGAACTGGCGCTGCTAATTGCAACGATAGTGATCATCGCTGTGCTGGTAATGCAGGTGCGCAGCGCTTCGGCGAAGATTGTAGGCGCACCGCTGCGTGATCTCAGCAGTCAGATGCTGACCATAGCAAACGGCGATCTTAAGACTCCCGCAGGACCCACCGCGGAGACTCACGAACTGCGTCAGATGCAACAGGCGCTTGAGGTGTTTCGCAGTAACGCTTTGGCCAAACAAAGCATGGACGCAGCTCAGAACGAAGCAGTTGGCGCGCTTAGCGAAAACCTCGCACGTATCGCTGACGGCGATCTTACCACTAGGCTTAATGGGCAATATGATGGGCTGCTCGCGCAGCTCCAACAGGATTTCAATCGTGCGCTGGATCGCCTCACGGCAACTCTTGGTTCTGTCTCCGAAAGCACGGGAAGCGTGACCCTCGGCGCATCGGAGATCTACAATGCATCCGCTGATCTCGCGGCACGCACACAGAAGCAAGCGGCCAGCGTCGCCAACATCACCGAGTCGGTCGCAGCTATCACCGAGCAGGTTGGCAATACTACCGCCTCGGTAGATGCCGCTAGCCAAGCCATTTGCCAGTTTGAGAGCGAAATTGCCGAAAACGCAAAGACCATCCGGAGACTCGTTGAAAGCATGCGCGCCATCGAAAGCGCAGCGCAAGCAATCGCCCAATCGATCGAGACGATTGACGGGATCGCTTTCCAGACCAATCTTCTGGCTCTAAATGCCGGGGTAGAAGCTGCGCGCGCTGGTGATTCAGGGAGAGGCTTTGCGGTTGTGGCTGCCGAGGTTCGCGCGCTTGCGCTTAAGGCGAGCGATGCGGCAGAACAAGTGAACGCCAGCATCACCTTTTGCAATGAGCAGGTTAAGACCGGTGTCGACTTGGCCGGTAAAATGGACGAGATTATCGTGCGGCTGGAGGTGCGGGTTAAAGAGATAGCAGAGTTGGCAGCCCAAATCGCCACAGCAGCCGGGCGTCAGTCAGAAGATCTTGGACGCGCCAGCGGAAATCTGGCCGAGATTGAGAGTTTCAATCAAGCCAATGCTGCGATGGTTGAACAAACCACAGCCGCGACCCAGCAACTCGCTTCGCTTTCACACCAGCTATCTGAGAAAGTTGGGCAGTTCCAACTGGATATTGTCTCAGCGCGGTCAGCCAACAGGCGAGACTTCCCCCAACCCTGCATCCAAAATAATCTAAATCATTCCGATCTTCGAACAGTTGCACCTTTCAAGAAAGCGCAAGCTGGATAA
PROTEIN sequence
Length: 725
MRESVTLSGRMSLAVSVRIAVMLVVLSATIAIVFEISTRRQAEEIGHITATEAAAKVSASLERVIGVASGMRSSLAAAKAKGNADRSLHNAILRGTLAENPQLLATWTAWEPDAFDGLDSRFANSVGNDASGRFVPYWFREDQAIKVTALVDYDEPGAGDYYLMAIERQQPVLLDPYDYPVGEDTLLITTVSLPILEQGRSVGVAGVDLSLAELQSELGAMVIPFGGQLTLLSAQRTVVFHPDAEKLGKPGLPKVEGIAFVDDPDLGSIMRIEKNVALVGIPDLWTVQIDLPMAAILRTTRLVELALLIATIVIIAVLVMQVRSASAKIVGAPLRDLSSQMLTIANGDLKTPAGPTAETHELRQMQQALEVFRSNALAKQSMDAAQNEAVGALSENLARIADGDLTTRLNGQYDGLLAQLQQDFNRALDRLTATLGSVSESTGSVTLGASEIYNASADLAARTQKQAASVANITESVAAITEQVGNTTASVDAASQAICQFESEIAENAKTIRRLVESMRAIESAAQAIAQSIETIDGIAFQTNLLALNAGVEAARAGDSGRGFAVVAAEVRALALKASDAAEQVNASITFCNEQVKTGVDLAGKMDEIIVRLEVRVKEIAELAAQIATAAGRQSEDLGRASGNLAEIESFNQANAAMVEQTTAATQQLASLSHQLSEKVGQFQLDIVSARSANRRDFPQPCIQNNLNHSDLRTVAPFKKAQAG*