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cn_combo_scaffold_12346_6

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 2362..5178

Top 3 Functional Annotations

Value Algorithm Source
TraA n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JJD9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 910.0
  • Bit_score: 1114
  • Evalue 0.0
Ti-type conjugative transfer relaxase TraA {ECO:0000313|EMBL:CDN96148.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Ag similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 966.0
  • Bit_score: 1140
  • Evalue 0.0
traA; Conjugal transfer protein TraA similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 957.0
  • Bit_score: 1071
  • Evalue 0.0

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2817
TTGGCGATCTACCATCTCAGCATGAAGCCGATTTCCCGAAGGCAAGGCCGGTCTGCCGTCGCGGCGGCGGCCTACCGCTCCGGCACGGTGCTGGTGAATGCGCGGGATGGATTGACCCATGACTATCGCCGCAAGGCCGGAGTTGAACACTCAGAAATCGTGCTCCCCGATGGCGTGCATGCAGAATGGGCCAAAGACCGCGAGTGGCTGTGGAACGCGGCCGAGGTTGCGGAGACCCGGAAGGACGCCCGTGTCGTGCGGGAAATCGAAGTGGCGCTCCCCCATGAGCTCGACCATGAAGAGCGGTTGGAGCTAACGCGCGCCTTCGCACGCGATCTTGCAAACCGCTACGAAGTTGCCGTCGACTTCGCAATTCATGCGCCGCACGATGGAGGCGACGTTCGCAACCATCACGCCCACATGATGATGACGACGCGAAAAGTCGAGAATGTCGGTCTGACCGACAAGACGATGCTGGAGCGCGAGAACAAGTGGCTACTCGCGAACGACCTGCCGACCTCGCAGATGCAGATGAAGGACATCCGGCAGGCCTGGGAGGTACATTCCAATAGTGCGCTTGCGCGCGCCGGCCATGACATCCGCATAGATCACAGATCGCACCGTGACCGCGGCCTGGAGATCGAGCCGACCCAGCATGTTGGCGTCCACGCCACGCAACTGGCTCGACGAGGTGTCGAGGTTGCGCGCACGGCGCTTCCTGTCGGGGCCGCGCGCAAGAATGCCGAACTGATCCGAAGTGATCCGGCACAGGTGTTGGCTCTGATCACGAACGAGAAGAGCGTCTTTGACCGGCAGGACATCGCGCGTGTGCTTCACCGCTACATCCCCGACAGCGTCGAGGAGTTTCAATCCGCGTTTGCCGCGGTCATGGCATCCCCGGCGCTGGTTGAGCTGAAGGCCGATACCGGCCGCGACCTTGCCAGATACTCGACCCGAGAAATGATCGGCATAGAGGGCGACACCGCCGACGCGGCGACTCGCCTGCATGCCGGCAACGGCTATGGCGTCGCCGAGCAACACGTCAAAGACGCGATTGCCCGCCAGGACGCCGCGTTGCGGCGCTCCGTCGAGACAGACACCGCCGCCAAGGTTGAGCGCGGTGAGATAACGGCAGCCGAGCGCGATCGGCGCGTGGCCGACGCGCGGCTTTCCGACGAGCAGCGCGCGGCCATCGAGCATGTCACGGGTCGCGAAGGGATCGCGGCCGTCGTGGGCTTCGCCGGCGCCGGCAAGTCGACAATGCTCGCTGCCGCGCGTGAGGCCTGGCAGGCACAAGGCTTCCGCGTGCATGGCGCCGCGCTCGCCGGCAAAGCCGCCGAAGGCCTGGAGGAGTCCTCCGGCATCGAGAGCCGCACCCTCGCGTCCTGGGAATTGCGCTGGCAGCAGCAGCGCGACCAGCTCGGTCCCGGCGACATTCTGGTGGTGGACGAGGCGGGCATGATCGGCAGCAGACAGCTTGCTCGGTTCGTCGCAGAGGCGGAGGCCGGCGGCGCAAAGATCGTCCTGGTTGGCGACCATGAGCAGCTGCAGGCGATCAATGCCGGCGCACCCTTCCGCGCCTTGGTCGAGCAGATCGGGGCGGCCGAGCTTTCGGAGGTGCGCCGCCAGAAAGTCGATTGGCAACGGCAGGCCTCAGTTGCCTTCGCCAAGCATCAGACGGCCGAGGCCCTGGAGGCCTACGAGCAGCACGGCGCCATCCACTACTCGGCCGGACACGACGAGGCGCGGGCCGAAATCGTGCGCGACTACCTGGCCGACCGGGCCGCCCGGCCGAACGACACGCGCGTTGCCATGGCACACCGTCGCGACGACGTGCGCGCCATCAATGAAGAGATCCGCAAGAACCTGCAGGACACCGGCCGGCTTGCCGCCGGACCATGGGCCGGCGAGCGGAGCTTCCAGACGAATGACGGCTCCCGGAAATTTAGTGCCGGCGACCGCGTCGTGTTTCTGGAGAACTCTTCAGGCCTAGGCGTGAAGAACGGCATGCTCGGCACCGTGACGGCCCTCGACGAGGGGCAGCTGATCGTCGCAGTGGACGGTAAGAGCAAGCCCGTTCAGGTCGCCATGGCCGAGTACAAGGCCATCGACCACGGCTATGCGACCACGATCCACAAGAACCAGGGCGCCACGGTCGACCGCTCCTATGTTCTGGCGTCGCGGTCGATGGATCGCCATCTGACCTACGTCGCTCTGACACGCCACCGCGAGAGCGCCCAACTCTATGCCGGCCGAGAGGACTTCACCGATCGGCGGGCCGGCCGCCTGGTCGACCATGGCGCAGCTCCTTACGAACACGATCCGCGCAACCGGCGCAGCTACTACGCCACGCTCGAAACGGAGACCGGCGAGCGTCGCACCGTTTGGGGCCTCGATCTTGAACGCGCTTTGAAAGCAGCCGGCAGCAAGGCCGGCGACCGCCTCGCCCTCGAACGGACCGGCGGCCAGGCCGTCACGGTCGCCGGCGCCCCGGCCGAGCGCAACAGCTGGAGGGTCGCCGGCGTCGACGAGCTCGCCCGCCGGCAACTCTACGATCGTCTGGGCCGAGACGGATCGAAGGAATCGACCCTCGACTACACCCGCGACTTCGCCCAGCGACGCAATCTCGCCATGGCCGAGCCCGCGGCGGTTTCCCCGCCTTCCCCCTCCCAGGAGCAGCCCATGGCACCAGCTCGCGAGGCCGCCGATCGACGGCAAGTCCGGCCGGCCGATCGTCACGACGGCCCCTCACAGCAAGAGCGTCGCCAGCTCGCGCCCTCGGAACACGATCGCCAACGCGCCGAAGCCGACCGCCGC
PROTEIN sequence
Length: 939
LAIYHLSMKPISRRQGRSAVAAAAYRSGTVLVNARDGLTHDYRRKAGVEHSEIVLPDGVHAEWAKDREWLWNAAEVAETRKDARVVREIEVALPHELDHEERLELTRAFARDLANRYEVAVDFAIHAPHDGGDVRNHHAHMMMTTRKVENVGLTDKTMLERENKWLLANDLPTSQMQMKDIRQAWEVHSNSALARAGHDIRIDHRSHRDRGLEIEPTQHVGVHATQLARRGVEVARTALPVGAARKNAELIRSDPAQVLALITNEKSVFDRQDIARVLHRYIPDSVEEFQSAFAAVMASPALVELKADTGRDLARYSTREMIGIEGDTADAATRLHAGNGYGVAEQHVKDAIARQDAALRRSVETDTAAKVERGEITAAERDRRVADARLSDEQRAAIEHVTGREGIAAVVGFAGAGKSTMLAAAREAWQAQGFRVHGAALAGKAAEGLEESSGIESRTLASWELRWQQQRDQLGPGDILVVDEAGMIGSRQLARFVAEAEAGGAKIVLVGDHEQLQAINAGAPFRALVEQIGAAELSEVRRQKVDWQRQASVAFAKHQTAEALEAYEQHGAIHYSAGHDEARAEIVRDYLADRAARPNDTRVAMAHRRDDVRAINEEIRKNLQDTGRLAAGPWAGERSFQTNDGSRKFSAGDRVVFLENSSGLGVKNGMLGTVTALDEGQLIVAVDGKSKPVQVAMAEYKAIDHGYATTIHKNQGATVDRSYVLASRSMDRHLTYVALTRHRESAQLYAGREDFTDRRAGRLVDHGAAPYEHDPRNRRSYYATLETETGERRTVWGLDLERALKAAGSKAGDRLALERTGGQAVTVAGAPAERNSWRVAGVDELARRQLYDRLGRDGSKESTLDYTRDFAQRRNLAMAEPAAVSPPSPSQEQPMAPAREAADRRQVRPADRHDGPSQQERRQLAPSEHDRQRAEADRR