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cn_combo_scaffold_2152_10

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 5285..5872

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Methylovorus RepID=C6X6P6_METSD similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 187.0
  • Bit_score: 198
  • Evalue 4.80e-48
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Hydro_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 193.0
  • Bit_score: 251
  • Evalue 8.70e-64
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 187.0
  • Bit_score: 198
  • Evalue 1.30e-48

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Taxonomy

CG_Hydro_01 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
TTGAACGACCCCAACATGGAAGACCCGGAAACCTGGCTCGACCACCACGGTAGTGCGTTGTACCGCTTTGCGCTACTGCGCCTGCGCGACGCCCAGAAAGCCGAGGAAGTGGTGCAGGACACCCTGGTCTCCGCCCTGCAGGCCCGCGCACGCTTCAACGGCGGCGCCTCGGTCCGCACCTGGCTGATCGGCATCCTCAAGCACAAGATCATGGATCTGTTCCGGCGCGAAGCACGCGAAGCGCCCCTGGAGTCGCCCGATCTCGTGTCAGCCGACGACGAATTGTTTGCCGAAGAAGATTTCTTCGACAGCAAGGGCAGCTGGCGCGAAAAAGTTTCCGACTGGGGCAACCCCGAAGATTCCCTGGAACGCAGTCAGCTCATCGCCATCCTGCAGCGCTGCCTCGATGCGCTTCCCAATCGCCTGGGACGATTGTTCATGATGCGCGAGGTGATGGAGGAATCCACCGAAACCATCTGTCAGGAAATGGAAATCTCGCCGACGAACGTGTGGACGATGCTGTATCGGGCCCGCATGGGGCTCCGGCAGTGTCTCGACCAGAACGGAGCCGGGCGCGCCCGGAACTAA
PROTEIN sequence
Length: 196
LNDPNMEDPETWLDHHGSALYRFALLRLRDAQKAEEVVQDTLVSALQARARFNGGASVRTWLIGILKHKIMDLFRREAREAPLESPDLVSADDELFAEEDFFDSKGSWREKVSDWGNPEDSLERSQLIAILQRCLDALPNRLGRLFMMREVMEESTETICQEMEISPTNVWTMLYRARMGLRQCLDQNGAGRARN*