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cn_combo_scaffold_2152_14

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 7212..7415

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 67.0
  • Bit_score: 133
  • Evalue 1.50e-28
RNA polymerase sigma factor id=1304133 bin=GWE1_T_denit_62_9 species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 68.0
  • Bit_score: 131
  • Evalue 2.50e-28
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 67.0
  • Bit_score: 79
  • Evalue 4.10e-13

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
GTGCTGGACGAATGCGCCAACCGCCTGAAGCCGGTGATGGCTCAGGTATTCAGCCTGCGCGAGGTGGCCGGCATGGAAACCGAAGAAATCTGTAAGGAACTGAACATCACCCCGACCAACTGCTGGGTACTGCTGCATCGGGCAAGAGTGTTCATGCGGCAATGCCTGGAGTTGAACGGGTTTTCGAAAGCGGGTGCCGCATGA
PROTEIN sequence
Length: 68
VLDECANRLKPVMAQVFSLREVAGMETEEICKELNITPTNCWVLLHRARVFMRQCLELNGFSKAGAA*