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cn_combo_scaffold_2149_6

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 4752..6122

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide transport system ATP-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HM47_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 437.0
  • Bit_score: 356
  • Evalue 5.40e-95
Lipopolysaccharide transport system ATP-binding protein {ECO:0000313|EMBL:ERF85516.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizob similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 437.0
  • Bit_score: 356
  • Evalue 7.60e-95
ABC transporter related protein similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 403.0
  • Bit_score: 337
  • Evalue 4.30e-90

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Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGGAACTTGCTTCGTTGGACGCGGGCGCGACAGGTGCTGTGCCTGAAATCGCCATCCGGGTTCATGGCCTGAGCAAGGCCTATCGCCTGTATGAAACCAATCGTGACCTGCTGCGAGAGGTGCTGACTGGAAAGCCGCGCCACCGGAACCACTGGGCACTGAAGGACATCTCCTTCGAGATCCCGCGAGGCGAAATTGTTGGCGTGATCGGGCCGAACGGCTCGGGCAAGAGCACCCTTCTCAAAATTATCACGGGGCTCCTTGACGCGACCTCGGGCTCGATCGAGGTCAACGGGCGCGTTTCAGCGATCTTGGAACTCGGTACGGGTTTTCATCCCGATTTTACCGGCCGTGAGAATATCATCACCGGCGGCATGTGCATCGGCATGACCCGCGAGGAGGTCGAGGCAAGGCTGCCTTGGATCGTCGAGTTCAGCGAGCTCGAAAGCGTTATCGATCAGCCCTTCCGAACCTATTCGAGCGGCATGCAGGCCCGTCTGACCTTTGCTACGGCGATCTCGGTCAATCCCGAGATCTTCATCGTGGACGAGGCGCTTGCCGCAGGCGACGCCTATTTCGTCTCGAAGTGCATGAAGCGAATTCGCGAGATTTGTGAGTCCGGTGCGACGGTTCTTTTCGTCAGTCATGGAACCGGACAGGTTGCGACGCTGTGCGATCGAGCGATATGGATCGAGAATGGCGTCGTTCGCGAAAACGGCCCCGCGCGCGATGTCGCCAAGCGATATGACTACAGCGTGCATGAAAAAATATCCGATGGAACCGGGAAGCTGGTCGACGTTTTTGTCGATGATGTCGATGATGATGCGGCGCAAGAGACGGATGACGATACTGGCAGTGTTGCCGTCTCTGGCGAGCTACAGAAAATTTTTCGCAAAGGCCCGGTCGAGATTACAAAAATCTCGATCGTCGACTCCCAGATGCGTCGGCGAAAGACATTTTATACTTGGGAAGACGTTATCATAAAGGTCGACTACATTTGCCGGGAAGACAGCATCCCTCACGAGACGCTGGGGCTCGCGATTGGCGTCGAGCGCGATTCGGATCTCGTTTTGATTTCGCAGTTCAGCACATGCAATTACAGCGGAAGAGAAGAAGGTCACTATCTCGAAGCGCCGTTTCGAATTCGAGCGGGAGCGAAGGGGTCGATCAGCGCAAAAATAAATGAAAATCAGATGCTTTCGGGCGTGTATTTGCTGTCAATTGGATTGGCTCCCAATGTGCCGATGACGGCGGAATTCTATGAGTATCACCACCGGGCCTATAAGATAAACATCGTCAATACGGGATTTGGCTCGGGGGCGGTGTTCTACCCGGATGTCGAATGGGCGCACGAGCATATCGATTCTTAG
PROTEIN sequence
Length: 457
MELASLDAGATGAVPEIAIRVHGLSKAYRLYETNRDLLREVLTGKPRHRNHWALKDISFEIPRGEIVGVIGPNGSGKSTLLKIITGLLDATSGSIEVNGRVSAILELGTGFHPDFTGRENIITGGMCIGMTREEVEARLPWIVEFSELESVIDQPFRTYSSGMQARLTFATAISVNPEIFIVDEALAAGDAYFVSKCMKRIREICESGATVLFVSHGTGQVATLCDRAIWIENGVVRENGPARDVAKRYDYSVHEKISDGTGKLVDVFVDDVDDDAAQETDDDTGSVAVSGELQKIFRKGPVEITKISIVDSQMRRRKTFYTWEDVIIKVDYICREDSIPHETLGLAIGVERDSDLVLISQFSTCNYSGREEGHYLEAPFRIRAGAKGSISAKINENQMLSGVYLLSIGLAPNVPMTAEFYEYHHRAYKINIVNTGFGSGAVFYPDVEWAHEHIDS*