ggKbase home page

cn_combo_scaffold_2295_23

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(15814..16515)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B38E45 similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 229.0
  • Bit_score: 215
  • Evalue 4.50e-53
FCD domain protein {ECO:0000313|EMBL:KCV60732.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 224.0
  • Bit_score: 166
  • Evalue 5.70e-38
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 224.0
  • Bit_score: 165
  • Evalue 2.00e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
GTGTCCCCTACCGCTCCCCAAGCGCCGATTCCCCTCGGCAAAGCTGTCAAATCCCTTCCCGAACTTCTGGCCGAGAAGCTTCTCGAGGACATCATGTCCGGGCGCCTGCCTGCGGGTGAGCGGCTGAAGGAGATCGCGCTGGCGGAAGAGCATGCCGTCAGCCGGGCGACCGTACGCGAGGCGCTGATTGCGCTGGCCAAGCTCGGGTACATCGAACAGGTCCCGCGCTTCGGCGCGCGCGTGGCGCCCTTCGCGAAGGACGACGTCTTCCACCTTTTCGAGATCCGGGCGGCCCTGCTGGCGATCGCCGCGCGCAACTGCGCGCTCGATCCAATGGCACCCCGCGCGGAGCTTGCGGAACTCACCGACGAGATGGAGCGGCTCGCCGCGGATCCCGATACGCCCGCGCAGACCTTCTCGGAGCGTTCGGTCGCCGCCCAGACATTGTTGATCAATGCCAGCGGCAACGGCCGACTGCCGGCGCTGTACGATCACCTCTCCGACATCAGCAGCTGGCGCATGATCCGAGGACGCGCGACGAGCTTCCTCAAGGCCGAGCGCCGCCACGAAGCCGCCAAGGATTGGCGGGCCATCGAACGCGCGATCAGTACCGGCGATGCGGGTGCGGCCGAAGCCGGCGCGCGGCTTCTGTTCGCACACTCCTCCGCCGCCGTCCGCGCCGAGCTGCAGGGCGCGGAGTGA
PROTEIN sequence
Length: 234
VSPTAPQAPIPLGKAVKSLPELLAEKLLEDIMSGRLPAGERLKEIALAEEHAVSRATVREALIALAKLGYIEQVPRFGARVAPFAKDDVFHLFEIRAALLAIAARNCALDPMAPRAELAELTDEMERLAADPDTPAQTFSERSVAAQTLLINASGNGRLPALYDHLSDISSWRMIRGRATSFLKAERRHEAAKDWRAIERAISTGDAGAAEAGARLLFAHSSAAVRAELQGAE*