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cn_combo_scaffold_2422_16

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 19905..21047

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VHM5_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 376.0
  • Bit_score: 481
  • Evalue 7.20e-133
Carnitine dehydratase {ECO:0000313|EMBL:ETR78166.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 373.0
  • Bit_score: 484
  • Evalue 1.20e-133
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 376.0
  • Bit_score: 481
  • Evalue 2.00e-133

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1143
GTGACACTACCACTCGAAGGAGTTCGCGTTATCGAAGTGGGCCAGGCGCTGGCCGGCCCTCTCGCCGGCGTGCTGCTGGCCGACATGGGCGCCGACGTCATCAAGGTGGAGAAGCCGGATGGCGGCGACGATGCGCGCATCTGGGGCCCTCCCTTCGGGCCGGACGGCATGACGTCGCTCTACTTCCACAGCCAGAACCGCAACAAGCGCTCCGTCGTCCTCGATCTGAAGCTGGCGACTGACGTCGATGCGCTGCATCGGCTGTGCGAGAATGCCGACATCCTGATCCAGAATCTCCGGCCAGGCGTCGTCGACGAGATCGGCATCGGCCCGGAGACCATGCTGAAACGGCATCCGCGACTGATCTACTGCTCGATCTGGGCCTTCGGGTATCAGGGCCCGATGCGCATGAAGCCGGGCTTCGATCCATTGCTGCAGGCCTATGGCGGCATGATGAGCGTCACGGGCCGCACCGAGGATCCACCGACCTTCTGCGGCGCCTCGATCAACGACAAGGCGACGGGCATGTTCTGCACGATCGGCGCGCTGGCGGCATTGCGCCTGCGCGATCGTACCGGCAAGGGCTGCCTCGTCGATACGTCGCTGTTCGACTCGGCCGTGCATTGGGTCGAGGGACAACTCAACAACTATCTCTCGGACAATCAGCCGCCCAAGCGGCACGGAACCGGATCCGGCGCCATCGTCCCCTACCAGCTCTTTGAGACAACCGACGCTCCGGTTTGCCTCGCCGCCGGCAACGATCGCCTCTGGGCGCGCTGCGCCAAAGTGCTGGGCCATCCGGAATGGGGCACGGATCCGCGCTTCGCCACGAGCGCGCAGCGCGTGCGCAATCGCGCCGAACTGGTCCCGCTGATCGCAGCGGTCATGCGCCACAAGAGCCGCGCTCACTGGCTGGCGGCTCTCGAAGAAGCAGGCGTGCCCTGCAGCCCGGTAAACGACATCGCCGAACTCGCGGCGACCGAGCAGCTTGCTGCAGCCGATCTCGTGCATCAGCTTCCCGACGGCGGTCCTCGCGTGGTCGGCCTGCCGATCTCCTTCGATCGCAAGCGTCCGCGGTCGACGCGGCCCGCTCCGACACTCGGTCAGCATACGCACGAAGTTCTGGGCCGCCCTGCTAAGTAA
PROTEIN sequence
Length: 381
VTLPLEGVRVIEVGQALAGPLAGVLLADMGADVIKVEKPDGGDDARIWGPPFGPDGMTSLYFHSQNRNKRSVVLDLKLATDVDALHRLCENADILIQNLRPGVVDEIGIGPETMLKRHPRLIYCSIWAFGYQGPMRMKPGFDPLLQAYGGMMSVTGRTEDPPTFCGASINDKATGMFCTIGALAALRLRDRTGKGCLVDTSLFDSAVHWVEGQLNNYLSDNQPPKRHGTGSGAIVPYQLFETTDAPVCLAAGNDRLWARCAKVLGHPEWGTDPRFATSAQRVRNRAELVPLIAAVMRHKSRAHWLAALEEAGVPCSPVNDIAELAATEQLAAADLVHQLPDGGPRVVGLPISFDRKRPRSTRPAPTLGQHTHEVLGRPAK*