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cn_combo_scaffold_2527_4

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(1179..1616)

Top 3 Functional Annotations

Value Algorithm Source
PilT protein-like protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 133.0
  • Bit_score: 142
  • Evalue 4.20e-31
PilT protein-like id=3785451 bin=GWC2_Methylomirabilis_70_24 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 139.0
  • Bit_score: 125
  • Evalue 3.80e-26
PilT protein domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 144.0
  • Bit_score: 75
  • Evalue 1.30e-11

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Taxonomy

R_Betaproteobacteria_62_17 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 438
GTGACGACCCGGCAGGCTGCGATCGACTGGGTAGCGTTGCCCGACGACGCGCTGCTTCTTGTCGATACCGCGCCCTTCATCTATCACTTCCAGAACGACGCTCGATATGCGCGTCGGTTTGCAGGATTGTTCGAGCAGGCCGCCGCCGGGCGATTGCGAATCGCATTGACGACGGTCACGCTGGCCGAAGTGCTGACGGGCCCCTATGGTCATGGTCGCGATGCGCTCGGCAAGCAACTCGAGTCTGCGCTTTGCGAATTCGACCTTCATCCACTGAGCGTGTCGATCGGCGTGGAGGCGGCACGACTGCGGGCGCGATATCGCCTGCGCTTACCCGACGCCATACAGTTGGCCACTGCACTGGAAATCGGTGCATGGGGGCTGGTCACTCACGACCGCGATTTCTCGGCTGTGCAGGATGTCCGGATCCTGATGTAG
PROTEIN sequence
Length: 146
VTTRQAAIDWVALPDDALLLVDTAPFIYHFQNDARYARRFAGLFEQAAAGRLRIALTTVTLAEVLTGPYGHGRDALGKQLESALCEFDLHPLSVSIGVEAARLRARYRLRLPDAIQLATALEIGAWGLVTHDRDFSAVQDVRILM*