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cn_combo_scaffold_2918_7

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(8960..9916)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=2 Tax=Pseudomonas aeruginosa RepID=V4SVR4_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 319.0
  • Bit_score: 171
  • Evalue 1.70e-39
Transcriptional regulator, AraC family {ECO:0000313|EMBL:KIV68117.1}; TaxID=1604022 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps similarity UNIPROT
DB: UniProtKB
  • Identity: 37.4
  • Coverage: 302.0
  • Bit_score: 181
  • Evalue 1.40e-42
DNA-binding transcriptional activator FeaR similarity KEGG
DB: KEGG
  • Identity: 37.0
  • Coverage: 319.0
  • Bit_score: 171
  • Evalue 4.90e-40

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Taxonomy

Pseudomonas sp. FeS53a → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 957
ATGCAAGCCCTGCACAGCCTCAGCCAGGGACGCGCCGGCTACGAACAATGGCAGCACGACGTGCGCGCGATCTGCGGACGCTTCGAGTCGCGCGCGCCCGAATCCCTGGACGACTTCTACGGCCGCATCGCGCTCAACCGCCTGCCGGGACTGGAGTTCGCCGACGTCGCCACCAACGCGCAGTCGCTGGCCAAGAGCGGGCACGACACGCGTGCCGAGGACGGCTGCTACTACTTCCTCATCTACCAGCAGGGCGGTGCTTCGGTGCTCGCGCAGAAAGGGCAGCAGGCGCTGCTGCGCACCGGCGATTGCGCGCTGATCGATTCACGCTACGCCAGCGAGTTCAATTACCTCGCGAGCATGCGCCACCTCTCGGTGCACCTGCCCTGCGAGGCGCTGGAGCGGCGCCTGCAGGGCCGCCGCCCGCGCCTGGCGCAGGCGTGGTCGGGATCGGGCGCGATGGGAGGCATCGTGGGGCGGTTCGTCAGCGAGATCGCCGCGCGACACGCCTTGTTCGGCGAGCGCGACGGCCGCGCCATGGTCGAGGCCCTGCTGGCCCTGCTGGTGCCGCTGGCCGACGACGTCGAGACCCTGGGCGGGCGCGCGCGCAACTTCGCCCGCGTGCAGGCCTACATCGAGGCGCGCCTGGGCGAGGAGCTCGAACCCGAGGCGATCGCGCGCGCCTGCGCGGTCTCGGTGCGCTCGCTGTACCGCCTGTTCGAGGAACGCGAGCTGACGCTGGGCCTGCACATCCGTCAGCTGCGCGTGGCCCGCTGCGCCGAGGCGCTGCGCGCGCCGTCGCACCGACACGAGAGCGTGACCCAGATCGCGCTGAAGTGGGGCTTCAAGGACAGCGCGCACTTCTCCCGCGCCTTCAAGGAGCGCTACGGCGTGGCGCCGCGCGAATGGCGCGCCGCGGCACATCTGCCCAAGCCATTGGCAGCCGCAGGCAAGTGA
PROTEIN sequence
Length: 319
MQALHSLSQGRAGYEQWQHDVRAICGRFESRAPESLDDFYGRIALNRLPGLEFADVATNAQSLAKSGHDTRAEDGCYYFLIYQQGGASVLAQKGQQALLRTGDCALIDSRYASEFNYLASMRHLSVHLPCEALERRLQGRRPRLAQAWSGSGAMGGIVGRFVSEIAARHALFGERDGRAMVEALLALLVPLADDVETLGGRARNFARVQAYIEARLGEELEPEAIARACAVSVRSLYRLFEERELTLGLHIRQLRVARCAEALRAPSHRHESVTQIALKWGFKDSAHFSRAFKERYGVAPREWRAAAHLPKPLAAAGK*