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cn_combo_scaffold_3028_16

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(17759..18721)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system Vgr family protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q2W2_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 348.0
  • Bit_score: 285
  • Evalue 8.30e-74
ImpA family type VI secretion-associated protein similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 348.0
  • Bit_score: 285
  • Evalue 2.30e-74
Type VI secretion system Vgr family protein {ECO:0000313|EMBL:ADX44221.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 348.0
  • Bit_score: 285
  • Evalue 1.20e-73

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Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
TCGGGCTTCCTCACCCGCTCGACGCTGGGCGGCAACTACGAGACCGCGAACGCCCTGCGCTTCGAGGACAAGCGCGGCGAGGAGCAGGTCTGGCTGCACGCCGAACGCAACCAGGACATCGAGGTCGAGAACGACGAGACCCATTGGGTCGGCCGCGATCGCACGAAGACGATCGACCGCGACGAGACCAGCCACATCAAGCGCGACCGCACGGAGACCGTCGACCACAACGAGACCATCACCGTCCACAACGACCGCAAGGAGCGGGTCGACCACAACGAGACGATCAGCATCGGCGACAACCGAGCTGAGGACGTCGGCAAGAACGAATCGGTCTCGATCGGCGACAACCAGACGCACGCTGTCGGCAAGAACCGCACGCGCACCGTCGGCGACAACGAATCGGTGACGATCGGCAAGAACCGCAGCAAGAAGGTCGGCAAGAACGAGAGCGACAAGATCGGCAAGAGCTGGTCGATCAAGGTCGGCAAGATGAAGACCGAGACCATCGGCATGGCCTCGATGCAGAACGTCGGGCTGGCCAAACTGGTGAACATCGGCGCGGCCTACAGCCTCAACGTCGGCGCGATGATGAGCACCGTGGTCGGCAACTCGCGCAGCGACAAGATCAGCAAGAAGCACACCGCCGACGTCGGCGAGGTCTACACCCTGAAGGTGGGTGCTGCGGGTGCGGCCCAGCAGAACGTGATGATCGCGAACATCCAGGCGCCGAGCCAGGGTGAGTCGAGCGGAAAGTCACCTTCGATGCTGCGCATGGATGCCGACAGCATCACCCTGCAGGTCGGCAGCTCCAGGCTGGTACTCACGCCGGACGCGATCTACCTGCAGGCCAAGGATGTGCACGTGCTGGCCGAGGCCACGGCCAATATCGATGCGCCGGATGATGTTCATTTGAATAGTGGACGCGCGGCGGCAGCACCCGCGCCCGGCGACGCGAACTGA
PROTEIN sequence
Length: 321
SGFLTRSTLGGNYETANALRFEDKRGEEQVWLHAERNQDIEVENDETHWVGRDRTKTIDRDETSHIKRDRTETVDHNETITVHNDRKERVDHNETISIGDNRAEDVGKNESVSIGDNQTHAVGKNRTRTVGDNESVTIGKNRSKKVGKNESDKIGKSWSIKVGKMKTETIGMASMQNVGLAKLVNIGAAYSLNVGAMMSTVVGNSRSDKISKKHTADVGEVYTLKVGAAGAAQQNVMIANIQAPSQGESSGKSPSMLRMDADSITLQVGSSRLVLTPDAIYLQAKDVHVLAEATANIDAPDDVHLNSGRAAAAPAPGDAN*