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cn_combo_scaffold_3567_12

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 16273..17061

Top 3 Functional Annotations

Value Algorithm Source
ABC-2 type transporter n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMC3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 262.0
  • Bit_score: 380
  • Evalue 1.20e-102
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=104087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas f similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 259.0
  • Bit_score: 388
  • Evalue 6.10e-105
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 262.0
  • Bit_score: 374
  • Evalue 2.40e-101

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Taxonomy

Pseudomonas frederiksbergensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGCTCCACAGTCTCTGGCGCAACCGTGGCCTGATTAGCTCGCTCATCAAGCGTGAGGTCGTCGGCCGGTATCGCGGCTCTTTCATGGGCATTCTCTGGTCCTTCTTCAATCCGGTTTTCATGCTGGCCGTCTATACTTTCGTTTTTAGTGTGGTTTTTGAAGCTCGCTGGCGCGGTGGCAGCGATTCCAAAACCGAATTTGCCCTTATCCTTTTCGCCGGAATGGTTGTTTTCAATCTGTTTGCGGAGTGTGCGAACCGCTCGCCAGGCTTGATTCTGTCCAATGTGAATTACGTCAAGAAAATCATCTTTCCTTTGGAGATCCTGCCCGTAGTCGCCTTGGGAGCGGCAGCGTTCCATCTGCTGGTCAGTGTATTGGTCTGGCTACTTTTCCATGTCTTGTTTTTCGGCATGCCGCACCTGACGCTGTTGTTGCTACCGTTTATCCTTCTGCCCCTGATGCTGTTCACATTGGGCATTGCCTGGCTGCTGGCATCCCTTGGCGTCTATCTGCGCGATGTCGGCCAGATCGTCGGTGTTGCCACCACTGCCCTGCTGTTCCTGTCTCCCATCTTCTATCCCGTATCGGCCCTGCCCGAAAACTATCAGACGCTATTGCACTTCAATCCGCTTACGCTCGTCATCGAACAAACCCGCCAGGTCCTCATCTCGGGCACCATGCCGAACATCAAGTTATGGGGTCTGTATCTGATTGGCAGTTCGACTGTCGCGTGGTTTGGTTTCGCTTGGTTCCAGCGGACGCGGAGGGGATTTGCCGATGTTCTTTGA
PROTEIN sequence
Length: 263
MLHSLWRNRGLISSLIKREVVGRYRGSFMGILWSFFNPVFMLAVYTFVFSVVFEARWRGGSDSKTEFALILFAGMVVFNLFAECANRSPGLILSNVNYVKKIIFPLEILPVVALGAAAFHLLVSVLVWLLFHVLFFGMPHLTLLLLPFILLPLMLFTLGIAWLLASLGVYLRDVGQIVGVATTALLFLSPIFYPVSALPENYQTLLHFNPLTLVIEQTRQVLISGTMPNIKLWGLYLIGSSTVAWFGFAWFQRTRRGFADVL*