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cn_combo_scaffold_3762_1

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(1..1266)

Top 3 Functional Annotations

Value Algorithm Source
type II secretory protein GspE n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00036546B8 similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 422.0
  • Bit_score: 648
  • Evalue 3.70e-183
Type IV fimbrial assembly, ATPase PilB {ECO:0000313|EMBL:KGQ18858.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 422.0
  • Bit_score: 662
  • Evalue 4.60e-187
general secretion pathway protein GspE similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 424.0
  • Bit_score: 646
  • Evalue 5.30e-183

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGAGCACTGCACCCGCCGCCAATCTGATGGGAATCACCGGGATCGCCCGGCGCCTGGTGCTGGATGGCGCCCTGGACGAGGCCGTGGCCCGCAAGGCCATGGACGGCGCCACCGCCGAGAAGATGCCGCTGGCCTCCTATCTGGCCGACCGCCGGCTGGTGTCGCCGGGCGCGCTGGCCGCCGCCAATTCCATCGAGTTCGGCATGCCGCTGGTGGACGCGCTGGCCATCGATCCGGCCCAGTCGGCGATTGCCCTGGTCAAGGAGGAGCTGCTGCGCAAGCACCAGGTGCTGCCGCTGTTCAAGCGCGGCAACCGGCTGTTTGTCGGCACTTCCGACCCCACCAACAACCGGGCGCTGGAAGACATCAAGTTCCAGACCAACCTGACCGTGGAGCCCATCCTGGTCGACGCCGACCGGATCAAGCGCAGCCTGGACCAGTGGCTGGAAGCCGCCGATGCCATGGCCGACGACCTGGCCGATGCGGACGGCCTGGACGGGCTGGAGGTGGGCGGCGGCGACGACGATCTGAGCAGCGATACCGGCGTGGACGCCAAGGGCGAGGACACCCCGGTCGTCAAGTTCGTCAACAAGGCGCTGGTGGACGCGATCCGCCGCGGCGCCTCGGACATCCACTTTGAACCGTACGAGACCGACTACCGGGTGCGCTTCCGCATCGACGGCATCCTGAAGACGTTCAAGAAGGTGCCGGTGAAGCTGCATGCGCGCATCGCCGCGCGCCTGAAGGTGATGGCCCAGCTGGACATCGCCGAGAAGCGTGTCCCGCAGGACGGTCGCATCAAGCTCAACATCAGCAAGACCAAGCAGATCGACTTCCGCGTGAGCACCCTGCCCACCCTGTTCGGCGAGAAGATCGTGCTGCGCATCCTGGACGGCAGCGCCGCCAGGATGGGCATCGAGAAGCTGGGTTACGAGCCGGACCAGCAGAAGCTGTTCCTGGACAGCATCCACAAGCCCTACGGCATGGTGCTGGTCACCGGCCCCACCGGCTCCGGCAAGACCGTGAGCCTGTACACCGCGCTGGGCATCCTGAACGACGAGACCCGCAACATCAGCACGGTGGAGGACCCGGTGGAAATCCGCCTGCCGGGCGTCAACCAGGTGCAGCAGAACGCCAAGCGCGGCATGACCTTCGCCGCCGCCCTGCGCAGCTTCCTGCGCCAGGACCCGGACGTGATCATGGTGGGCGAAATCCGCGACCTGGAAACCGCGGAGATCGCGGTGAAGGCGGCCCAGACCGGCCAC
PROTEIN sequence
Length: 422
MSTAPAANLMGITGIARRLVLDGALDEAVARKAMDGATAEKMPLASYLADRRLVSPGALAAANSIEFGMPLVDALAIDPAQSAIALVKEELLRKHQVLPLFKRGNRLFVGTSDPTNNRALEDIKFQTNLTVEPILVDADRIKRSLDQWLEAADAMADDLADADGLDGLEVGGGDDDLSSDTGVDAKGEDTPVVKFVNKALVDAIRRGASDIHFEPYETDYRVRFRIDGILKTFKKVPVKLHARIAARLKVMAQLDIAEKRVPQDGRIKLNISKTKQIDFRVSTLPTLFGEKIVLRILDGSAARMGIEKLGYEPDQQKLFLDSIHKPYGMVLVTGPTGSGKTVSLYTALGILNDETRNISTVEDPVEIRLPGVNQVQQNAKRGMTFAAALRSFLRQDPDVIMVGEIRDLETAEIAVKAAQTGH