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cn_combo_scaffold_4326_1

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 1..834

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIB4_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 266.0
  • Bit_score: 475
  • Evalue 3.70e-131
RND efflux system, outer membrane lipoprotein, NodT similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 266.0
  • Bit_score: 475
  • Evalue 1.10e-131
RND efflux system, outer membrane lipoprotein, NodT {ECO:0000313|EMBL:ABE64033.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 266.0
  • Bit_score: 475
  • Evalue 5.20e-131

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
CTCTTGAAGCGGCAACAGGAGCAGGGCCAGATCGCCCTGACCGACGTTGCGGCGCAGGAAACTGCGGTTTCGCAGACCAGGCTCTTGTTGCCGCCGCTCGAAAGGCAGCTCGCGCAACAGCGTCATTTGTTGACGTTTTTGACCGGACGCCTGTCGAGCGACGCACCGGCCGAAACTTTCAATCTTGGCTCGTTTCGAATGCCGCGCCGTCTTCCTCTCAGCTTGCCGGCTGATCTCGTAAGACAGCGCCCCGACATTCGCGCCGCCGAGGCCAATCTCCGCTCCAGCAACGCAATGATCGGAGTGGCGATCGCCAACCGCTTGCCGCAGATCTCCCTGACCGGCAATGTCGGCGCGGCGGCTGCCCGATTTGCAGAACTGGCCACACCGGGAGCGGGCCTCTGGATGCTGGCCGGGAATGCGGCGCAAACCATTTTCGATGCGGGAACGCTGGAAAACAAGCAGGTCGCCGCGGAACAGGAAACCAATCAGGCTCTCGCTCAGTATCGCAGCACGGTGCTTGCTGCGTTTCAAAACGTCGCGGACGTCTTGCGGGCTCTTCAGGCCGGTACCCGCGCCATCAGTGCCGCGACAGATGCGGAGCGATCCGCATCGGAGAGCATCGCGTTGTTGCGCAAGCAGGTGGATCAGGGACAGATCAGCGTGCCGCTTCTGCTCGCCGCGCAACAGGCCTATCTGCAGACCTCTCTTGCGCGCCTCGATGCGCAGGCTTCTCAACTCGCCAATACGGTCGCGCTGTTTCAGGCTCTCGGCGGCGGCTGGTGGAATAGGGAATCCGGATTCGCTCGTGTTACCGAGGCAAAGCCGCTCTGA
PROTEIN sequence
Length: 278
LLKRQQEQGQIALTDVAAQETAVSQTRLLLPPLERQLAQQRHLLTFLTGRLSSDAPAETFNLGSFRMPRRLPLSLPADLVRQRPDIRAAEANLRSSNAMIGVAIANRLPQISLTGNVGAAAARFAELATPGAGLWMLAGNAAQTIFDAGTLENKQVAAEQETNQALAQYRSTVLAAFQNVADVLRALQAGTRAISAATDAERSASESIALLRKQVDQGQISVPLLLAAQQAYLQTSLARLDAQASQLANTVALFQALGGGWWNRESGFARVTEAKPL*