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cn_combo_scaffold_4647_5

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: 3007..3666

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J3H9_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 217.0
  • Bit_score: 370
  • Evalue 1.30e-99
Two component transcriptional regulator, winged helix family; K02483 two-component system, OmpR family, response regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 219.0
  • Bit_score: 389
  • Evalue 3.00e-105
Two component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 217.0
  • Bit_score: 370
  • Evalue 3.80e-100

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Taxonomy

RLO_Burkholderiales_64_99 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGCGTGTCCTGCTGATTGAAGACGATGACGTGCTCGGTGCAGCCGTGCGCGACCAGATTGCGAGCGATGGCCATTCTGTGGATTGGGTGCGCCGCCTGGATGCGGGAGACAGCGCGATCGCGGGTGTGCCCTACGACCTTGCCCTGCTCGATTTGATGCTGCCGGATGGCCGGGGCATTCCCTTCCTGCGGCGCCTGCGCGCGCGGGGCGTGGTCACACCGGTCATCATCCTGACGGCGCTGGATCAGGTGTCGGACCGGATCGAGGGGCTGAATGCTGGCGCCGACGATTACCTCGTCAAGCCGTTTGATCTGGCAGAGCTGTCGGCGCGCATCGGGTCGGTCGCGCGGCGGTACAGCGGCAATCCCAATCCCATCCTTACCCATGGGCCGCTACAGATCGACTTGGCCGCACGCAGCATCCGCCGAGACGGCCACTTGGTGCCGCTGACGGCGCGCGAATGGGCGTTGTTCGAGGCCTTTCTATCCCGGCCTGGCCAGTTGCTCTCGAAGACACAACTGGAAGAAAAGCTCTATGCCTTCGACACCGAGGTGGAGAGCAACACCATTGAGGTGCATGTCAGCCGCCTGCGCAAGAAACTGGGCGCCGAGATCATCGTGACCGAACGCGGACTGGGCTATCGGTTGGGGCACGCATGA
PROTEIN sequence
Length: 220
MRVLLIEDDDVLGAAVRDQIASDGHSVDWVRRLDAGDSAIAGVPYDLALLDLMLPDGRGIPFLRRLRARGVVTPVIILTALDQVSDRIEGLNAGADDYLVKPFDLAELSARIGSVARRYSGNPNPILTHGPLQIDLAARSIRRDGHLVPLTAREWALFEAFLSRPGQLLSKTQLEEKLYAFDTEVESNTIEVHVSRLRKKLGAEIIVTERGLGYRLGHA*