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cn_combo_scaffold_4766_9

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(8016..9095)

Top 3 Functional Annotations

Value Algorithm Source
potA1; spermidine/putrescine import ATP-binding protein PotA (EC:3.6.3.31); K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31] Tax=RBG_16_Acidobacteria_64_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 286.0
  • Bit_score: 322
  • Evalue 9.60e-85
UPI0001DE975B related cluster id=4897964 bin=GWC2_Methylomirabilis_70_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 355.0
  • Bit_score: 320
  • Evalue 2.00e-84
putrescine ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 49.9
  • Coverage: 351.0
  • Bit_score: 317
  • Evalue 4.80e-84

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Taxonomy

RBG_16_Acidobacteria_64_8_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGTCAGGCGCAACGACGCTGTCTCTGCGCAAGGCATCCAAGGTCTATGCAGGGGCGACGATCCTCCAATCGATCGACCTCGATGTTCAGGAGGGTGAGTTTATTTCCCTCTTAGGCCCGTCCGGATGTGGCAAGACGACGACGCTGAATATTATCGCGGGCTTCGTTCGGCCTGATGAAGGCGAAGTTCTTATCGGAGGGCAGTGTGTCAACGACGTTCCGCCCTACCAACGCAACCTCGGCATGGTCTTTCAAGGCCATGCCCTTTTTCCTCATTTGACCTGTTTTGACAATGTGGCCTTCGGATTGAGAATGCGCAATCTGGATGAGGCCACAATACGCGCACGCGTGACTCAGGCTCTCGATCTCGTGCGACTTAACGGATTTGACGAGCGCTTCCCGCGCCAACTCTCCGGGGGGCAGCAACAGCGCGTTGGCCTCGCTCGCGCGCTCGTCATTGAGCCGCGCGTGCTCCTTCTCGATGAACCGCTCAGCAACCTGGACGCCAAACTGAGGCGCGCGATGCAGAGTGAGCTCAGAGCGATTCACACCAAGACCGGCACCACAATGATCTACGTCACTCACGATCAGGAGGAGGCTCTAACGCTCTCGGATCGCGTGGCCGTCATGAATGCCGGGCGCATTGAGCAGCTCGATACGCCTGAAGGTATCTATCGACACCCGAGAACGCGCTTCGTTGCCGACTTCATCGGCTCGTCCGCGTTCTTGCGGGGAGAGGTGGGGGAGAAGCGCTCCGACAGCATCCTCGTTCGAATTGGCGAGGCAGGGTACGTCGCAGTGCCGCACTATCATCAAATCGCACAGGGTTCCGCGGTCCATCTGGGCATCCGATCGGATCAGATCCGCATCGACACTGGCGCGACAGCATCCTCTCCTGAACTTTCATTGCAGGGGCGTATCGTCGACCGAGCATTCGCGGGATCGGTATCGCATATCACCATCGAACTGACGGATGGGCAAACCATCGTTGTGCACCTGCCGAACCCTCCAGACGACGCGATGCCAGGGGCGCCGGTGCACTTGGGGGGCGCTGTCGCGAATTGGATGGTTCTGCCATGA
PROTEIN sequence
Length: 360
MSGATTLSLRKASKVYAGATILQSIDLDVQEGEFISLLGPSGCGKTTTLNIIAGFVRPDEGEVLIGGQCVNDVPPYQRNLGMVFQGHALFPHLTCFDNVAFGLRMRNLDEATIRARVTQALDLVRLNGFDERFPRQLSGGQQQRVGLARALVIEPRVLLLDEPLSNLDAKLRRAMQSELRAIHTKTGTTMIYVTHDQEEALTLSDRVAVMNAGRIEQLDTPEGIYRHPRTRFVADFIGSSAFLRGEVGEKRSDSILVRIGEAGYVAVPHYHQIAQGSAVHLGIRSDQIRIDTGATASSPELSLQGRIVDRAFAGSVSHITIELTDGQTIVVHLPNPPDDAMPGAPVHLGGAVANWMVLP*