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cn_combo_scaffold_5018_5

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(2658..4556)

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AFB9_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 29.4
  • Coverage: 337.0
  • Bit_score: 99
  • Evalue 1.30e-17
Collagen triple helix repeat protein {ECO:0000313|EMBL:EFC99478.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DS similarity UNIPROT
DB: UniProtKB
  • Identity: 29.4
  • Coverage: 337.0
  • Bit_score: 99
  • Evalue 1.80e-17
collagen triple helix repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 26.2
  • Coverage: 527.0
  • Bit_score: 83
  • Evalue 2.00e-13

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Taxonomy

Hungatella hathewayi → Hungatella → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1899
ATGACGAACACGATCGCGGTCTTTCAGATCTCGTCGGAAGAGGACCTGCGCTTCCAGCTCGACTTTGTTGGCCTGGCGCTAACCGGCCGGACGCTAAAGGTCAGCGTCCGTGAGCGCTCGTCCAACGCGCTAAAGGTCGACCTGCTTGCCCCGTCAAACCTGACGTTGGCGGGCGCGGGGAACCTGACGGTTTTCTACCCGCGCGCTTCGATGACCGGTTGGGCCAAGGGTATCGAGTACGAGGCCGATATCATCGACGAGACCGCCGGATCCGCGACCCGGATCATGGCGGTACGCTTTGTCTACGATCACCCGGGGAACCTCGTCTACGGCGTCAAGGGTAACCAGGCGTCGGTATCGTGGGGCAGCAACCAGGCTGTCGTGACGGCGATCGGCGGCGTAGGCCCTCCGGGGCCTGCGAACGTCATCACGATTGGCGCCGTCGACACACTCGAAACAGATGAGCCCGCGACCGCCTCACTGACCGGCAGCGCCCCGACGCAGGTTCTGAACCTGGGCCTGCCGAAGGGGAATACTGGAACCGCGGCGACGATCGCGGTTGGCACTGTCACCACAGTCGCACCTGGCGCGCCTGCCGACGTTACCAACAGCGGAACCTCCGGCGCAGCGGTATTCGACTTCGATATCCCTGCGGGTGCGGCTGCGACGATCGCCGCGGGCGACGTTACAACGATTGCTGCGGGACAGCCGGCCGCTGTTACCAATAGCGGAACCTCATCGGCAGCGGTGTTTGACTTTGATATCCCCGCCGGTGCGGCTGCAACAGTGGCGGTCGGTACCGTCACGGAGAGCTTGCCAGGTGATCCACCGACCGTAACCAACGTCGGCACTGCCACAGCCGCCGTCTTCGACTTCGCCCTTCCTCGGGGCGACCAAGGCCCGCCGGGTTCGGTTGTGGACGGCGATAAGGGCGACGTCGTTGTCAGCGGTGGCGGCACCGTTTGGACGGTGCAGGACGGCTATGTACCGAAGTCGGGCGGGGCCTTTACCGGGGCGATTATGGTTGGGTCGGCGAGCCCGCCCGGCGCTGAGCTTGAGGTGCACTCACTAGGGGGCGATGAAGATGTCCGCGTGCAGCTGCGAGCCAACGCCACGCACACCGCTCAGTTTGGCTGCTCAACCGGGCTGGTCTTTATCGACGCCGCGCAGAACAAGCCGTTCGGAATCTACACAGCCGGCGTTGCGCAGCTTTTGATCGACGGCACGACCGGCGTTGCTTCGTTCACCCAGCGCCCAAACTGGGGCGCCACGCCGTTCGACACCGACAACCTCGGCGCATTCGGAGGCGACAGCGGTACAGGTGGCGTTTGGGGCCTCGTTCCCGCGCCTGCGGCGGGCGACGCCGCGTCCGGCAAAGTCCTTGTTGCGGGCGGCGGGTGGGTCGAGCGAGGGAACGTCATCAACCGACGCACGACCGTCCAGACGACTGTGTCCGGTACGACGAAGGACTTTGCGCTGACGGGCACGGTGCGGCGCTTCCGAATGATGCTCAATGGCGTGTCGACCACAACGTCCGATCGGCTGATGATCCAGATCGGCACGGGTGGCGTGCTCAAGACCACGGGTTATGTTGGCGCAGCGGCTCTCCTGCCTCACAACACCCTTCCCGCGGTGGCGAATATCACGAACGGCGCTGCGCTTACGGGCGTCGGCGGGTCGTCGCTTCAGTGGGATGGCTGGGTCGAGTTTGCGCTCCAGGACGCGGCTACGAACACCTGGACCTGGTCTGGGTCGTTCAGCATCAGCGGCAGCATGACCGCGGCGGGCGGGTCAGTGTCGCTCTCCGGCGCCTTGGACATCGTACGGCTGACCATGGATGCGGGAGAAGGCACTTTCGACGCCGGTTCCGTCTCGGCCGAATACGACACTACCGCATAG
PROTEIN sequence
Length: 633
MTNTIAVFQISSEEDLRFQLDFVGLALTGRTLKVSVRERSSNALKVDLLAPSNLTLAGAGNLTVFYPRASMTGWAKGIEYEADIIDETAGSATRIMAVRFVYDHPGNLVYGVKGNQASVSWGSNQAVVTAIGGVGPPGPANVITIGAVDTLETDEPATASLTGSAPTQVLNLGLPKGNTGTAATIAVGTVTTVAPGAPADVTNSGTSGAAVFDFDIPAGAAATIAAGDVTTIAAGQPAAVTNSGTSSAAVFDFDIPAGAAATVAVGTVTESLPGDPPTVTNVGTATAAVFDFALPRGDQGPPGSVVDGDKGDVVVSGGGTVWTVQDGYVPKSGGAFTGAIMVGSASPPGAELEVHSLGGDEDVRVQLRANATHTAQFGCSTGLVFIDAAQNKPFGIYTAGVAQLLIDGTTGVASFTQRPNWGATPFDTDNLGAFGGDSGTGGVWGLVPAPAAGDAASGKVLVAGGGWVERGNVINRRTTVQTTVSGTTKDFALTGTVRRFRMMLNGVSTTTSDRLMIQIGTGGVLKTTGYVGAAALLPHNTLPAVANITNGAALTGVGGSSLQWDGWVEFALQDAATNTWTWSGSFSISGSMTAAGGSVSLSGALDIVRLTMDAGEGTFDAGSVSAEYDTTA*