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cn_combo_scaffold_5061_4

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(1109..2032)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FKY9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 298.0
  • Bit_score: 224
  • Evalue 1.70e-55
Transcriptional regulator {ECO:0000313|EMBL:CDP50432.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 297.0
  • Bit_score: 307
  • Evalue 2.70e-80
Transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 284.0
  • Bit_score: 215
  • Evalue 2.80e-53

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGCCGTTCGACTGGAACGACGCGCGGTACCTGATTGCTGTTGCCCGGGCGGGCTCAACGCTGGGCGCCGCTCGTAGCCTCGGCGTCAACCAGACGACGGTTGCACGGCGCATCGAGGCGCTTGAGCAGAACCTCGGCATCGCCCTGTTTGAGCGCCGCGCCGACGGCTACCGGGTAACGGAGCGAGGGCGAGAAGCGCTGCTGCTGGTGCAACCGATGGAGCAGGCCGCGACGGCGCTGCTGGAAGCATCGCAGGCCTGGCGGCGCGATATCGCTGGTGTCGTACGCATCACCACCACGGAGATATTGGCAACTTCAGTACTGGCGCCGCTGCTGTCACGCCTGCGCGACACCCAACCTGCGCTGCAGGTGGATCTGGTGGCGGACGACCGGCGGCTCGACCCATTGCGCGGCGAGGTCGACATAGCCATTCGCGTCGGCTCCGAGCCACAGGACCCGGGCCTCGTGCGCCGCCGGCTGGGGCAGAGCGTCTGGACGCTGTTCTGCTCGCGCAGCTACGCCGACCGCCACGGCGTGCCGCACGATCTGAACGCATTGAGGCACCATGCGATCATTGCCGGCAGCGGCAGCCTCGCTGGCCTTTCAAGCCTGTTGTGGCTGAGAGGACTGGCGCCCGATGCGCCCGTCGCGCTGCGGTGCAACTCGGTGCCCAACCTGGTGGCCGCCGTCGGAGCTGGAGTCGGCATCGGGCCGCTCCGGTATTTCATCTCTGCCGACAATCCCGACCTGATCCGCGTCCTGCCCGATCTCGACGATACGCCAAGGGGGGATGTCTGGCTGATCTATCCGGAAAGCCTGCGGCAAAGCCCGCCCGTGAAGTTCCTCGTCGCGGCACTGGCCGAGACCTTTGCGACGGTCCGCGACCGGATGGCCGGACACGGACCGCATTGGCAGGAGGCGTAG
PROTEIN sequence
Length: 308
MPFDWNDARYLIAVARAGSTLGAARSLGVNQTTVARRIEALEQNLGIALFERRADGYRVTERGREALLLVQPMEQAATALLEASQAWRRDIAGVVRITTTEILATSVLAPLLSRLRDTQPALQVDLVADDRRLDPLRGEVDIAIRVGSEPQDPGLVRRRLGQSVWTLFCSRSYADRHGVPHDLNALRHHAIIAGSGSLAGLSSLLWLRGLAPDAPVALRCNSVPNLVAAVGAGVGIGPLRYFISADNPDLIRVLPDLDDTPRGDVWLIYPESLRQSPPVKFLVAALAETFATVRDRMAGHGPHWQEA*