ggKbase home page

cn_combo_scaffold_5324_6

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(5495..6241)

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V1V5_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 245.0
  • Bit_score: 333
  • Evalue 2.10e-88
short-chain dehydrogenase/reductase sdr similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 245.0
  • Bit_score: 333
  • Evalue 5.80e-89
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADU37958.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 245.0
  • Bit_score: 333
  • Evalue 2.90e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGCATGACACAAAAAGTCTCGCCGGCAAGGCCGCGCTGGTCACCGGCGGATCGCGCGGCATCGGTGCGGCCATCGTGCGCCGGCTCGCCAGCGAGGGCGCGTCCGTGGCGTTCACCTACGCCGCCGCATCCGCGGCGGCCGACCAGTTGGCGGCGCAGGTCGGGGCCAGCGGCGGCAAGGCCTTCGCGATCAGGGCCGACAGCGCCGAACCCGCCGAAGTGCAGGCGGCTGTGGCGCAGGCGGCGCAGCGGTTTGGCCATCTGGACATCCTGGTCAACAACGCCGGCATCATCAGCAACGGCAGCGTCGACCACTACGCGCTGGCCGATTTCGATCGCATCGTGGCGGTGAACGTGCGCGCCGTGTTCGTGGCCGTGCAGGCGGCGCTGGCGCACATGGGCGAGGGCGGCCGCATCATCACCACCGGCAGCGTGGCCGCGGACCGCACCGCAGTTGCCGGCTCGTCCGCCTACAGCATGAGCAAGGCCGCCGTCGCCGGCCTGACCCGCGGCATGGCCCGCGACCTCGGCCCCCGCGGCATCACCGTCAACGTGGTGCAACCCGGCCCCACCGAAACCGACATCGTCAGCGACGAAGCCGTGCGCGAACGGCTACGCCCGCTGATGGCGCTGGGACGCATGGGCAGCGGCGACGAAGTAGCCAGCCTGGTCGCCTACCTGGCTCGGCCTGAGGCCAGCTACATCACCGGCGCGGCGCTGACGGTTGATGGTGGTTATCTGGCGTGA
PROTEIN sequence
Length: 249
MHDTKSLAGKAALVTGGSRGIGAAIVRRLASEGASVAFTYAAASAAADQLAAQVGASGGKAFAIRADSAEPAEVQAAVAQAAQRFGHLDILVNNAGIISNGSVDHYALADFDRIVAVNVRAVFVAVQAALAHMGEGGRIITTGSVAADRTAVAGSSAYSMSKAAVAGLTRGMARDLGPRGITVNVVQPGPTETDIVSDEAVRERLRPLMALGRMGSGDEVASLVAYLARPEASYITGAALTVDGGYLA*