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cn_combo_scaffold_5324_10

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(10785..11108)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Nevskia ramosa RepID=UPI0003B5FCC2 similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 102.0
  • Bit_score: 140
  • Evalue 1.10e-30
Periplasmic binding protein {ECO:0000313|EMBL:EIT70015.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocar similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 100.0
  • Bit_score: 117
  • Evalue 1.40e-23
periplasmic binding protein similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 98.0
  • Bit_score: 101
  • Evalue 1.20e-19

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Taxonomy

Hydrocarboniphaga effusa → Hydrocarboniphaga → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
TGGGTGAACGACATCATCCACCTTGCCGGCGGCATCAACCCGTGGGGCGAGGTGGATGCCCGCAGCGTGCCGCTGCACTATGCCGACGCGGCGGCCGCGCGCCCCGACATCGTGGTGATGAGCTGGTGCGGCGTGAAGGTGGAGAACTATCGCGCCGACAAGGTACGCGCGCGCCCGGACTGGGCCGACGTGCCTGCCGTGCGCCACGACCGCATCCACGCGATCAGCGAGGCATTCCTCGGCCGGCCCGGCCCGCGGCTGGTCGAAGGCTACCGGCAACTGCGCGCCGCCATCGCGGCGGCTGGCGATCCAGCGGGAGCATGA
PROTEIN sequence
Length: 108
WVNDIIHLAGGINPWGEVDARSVPLHYADAAAARPDIVVMSWCGVKVENYRADKVRARPDWADVPAVRHDRIHAISEAFLGRPGPRLVEGYRQLRAAIAAAGDPAGA*