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cn_combo_scaffold_5479_2

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(529..1050)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B78C96 similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 132.0
  • Bit_score: 188
  • Evalue 5.70e-45
Glycine betaine transporter periplasmic subunit {ECO:0000313|EMBL:EHH14027.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 37.8
  • Coverage: 143.0
  • Bit_score: 99
  • Evalue 4.90e-18
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 35.1
  • Coverage: 148.0
  • Bit_score: 92
  • Evalue 9.20e-17

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Taxonomy

Mesorhizobium amorphae → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGACGAGAGACAAGATCCTGCAAGGAGCCCTGGCGATCGGCCTTGGCGTTTCGGCGATGCTGGGCGCGACAGGCTTTGCGATGGCTCAGACGAAACTTCCGGGCGCTGGAAAGACCGTGAGTCCGGCTCGACCGAACTGGGATTCGTTCTGGTTCGGCCAGAGGATCATCGATATCGGCATGGAACGACTTGGCTATAAGGTCGAGGATCCCAAGACGCTGGCGCCGGCGGCGATCTTTACCTCCATGGCTCGCGGCGACGTCACCTATACCGCCGACACGATCCTGCCGAACCACGCCGATCTCTACGCCAAGACGGCCGCGGACGTGATGGCCGTCGGACCGCTGATGGATCCTGGCACGATCCAGGGCTACATGGTCGACAAGAAGACAGCCGATGCCCACAATATCCGCTTCCTGGAGGATCTCGCCGATCCAAAGATCGTGGCGACGGCAAAGCCGACATGGTCGGTCCCTCCGTTGGCTGGGCCGGCTCGTTCGCCGTGGCCCAGGGCCACCTGA
PROTEIN sequence
Length: 174
MTRDKILQGALAIGLGVSAMLGATGFAMAQTKLPGAGKTVSPARPNWDSFWFGQRIIDIGMERLGYKVEDPKTLAPAAIFTSMARGDVTYTADTILPNHADLYAKTAADVMAVGPLMDPGTIQGYMVDKKTADAHNIRFLEDLADPKIVATAKPTWSVPPLAGPARSPWPRAT*