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cn_combo_scaffold_5557_4

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(3001..3522)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CDY1_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 37.4
  • Coverage: 123.0
  • Bit_score: 88
  • Evalue 8.10e-15
Response regulator {ECO:0000313|EMBL:EAR50847.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (s similarity UNIPROT
DB: UniProtKB
  • Identity: 37.4
  • Coverage: 123.0
  • Bit_score: 88
  • Evalue 1.10e-14
putative two-component response regulator similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 123.0
  • Bit_score: 84
  • Evalue 3.30e-14

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Taxonomy

Oceanicola granulosus → Oceanicola → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGATCGCATGGTCGGCAGCCAACCGGCCTGATGTTCTTACCGACCCCTTCGCCAGGGTCGACGAGTCGGCCGCCTATCCGGCAGCTTTTGCGAGGTCGCTCACCATCGACGAGCCGCCACGCGGCCGCATTCTCATCGTCGAGGACCAAGTACCCGTGGCGCTCGAAATCCAGCGAACTCTGCGTGACGCGGGGTACCGCATCGTCGGTCCGGCCGGCAGCCAGAGTGAGGTTACGCGCCTCGTGCGCCGTGGCGGCCTCGATGCGGCGGTGATCGACGCGGATTCCCGGCGGAGCGCACCGTACTCGGTGGCTGACTGGCTGGCGGCGGCGGGGGTGCCGTTCGCGTTCTTGGTGAGTAACACCACCGCCCTGCCGCACGATCATGCCCATCGACCGCAGATCAGCAAGCCATGCTCGGCCGCAGCCCTGGTGGATACGGTCGACCTAATGGTCGAGGGCGGACCGGGCGCTGCGCCGCCGCCGCCGGCGTCGTGGCCACGCCATCTGCCGCAACTTTAG
PROTEIN sequence
Length: 174
MIAWSAANRPDVLTDPFARVDESAAYPAAFARSLTIDEPPRGRILIVEDQVPVALEIQRTLRDAGYRIVGPAGSQSEVTRLVRRGGLDAAVIDADSRRSAPYSVADWLAAAGVPFAFLVSNTTALPHDHAHRPQISKPCSAAALVDTVDLMVEGGPGAAPPPPASWPRHLPQL*