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cn_combo_scaffold_5619_2

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(1678..3273)

Top 3 Functional Annotations

Value Algorithm Source
Probable Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ49_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 549.0
  • Bit_score: 734
  • Evalue 6.50e-209
RND transporter {ECO:0000313|EMBL:KIO48136.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 543.0
  • Bit_score: 777
  • Evalue 1.60e-221
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 534.0
  • Bit_score: 666
  • Evalue 6.20e-189

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1596
ATGAAATCTATTGCCAAATTAATAATTGTTGCCGCACTGATTGGCGTCGCGTTGGCCGCGGGATATCACTGGGGGAGTGCCAAACCCGTGACCCCTGCACCAAACCCAGCCGAGACGTCGGCACCAAAAGGCAAAGGCAAGATTCTCTATTACCGTAACCCGATGGGGCACCCCGACACATCGCCGGTACCGAAGAAAGATTCGATGGGCATGGACTACCTCCCGGTTTATGAAGGCGAAGAGCCTTCCGATGCCTCAGGGGTGAAGATCAGCACCGAAAAAATACAAAAGCTCGGGGTGAAAACCGAGGTTGTCGCGCTGAGGGAGCTCACGCGCACGGTGAGGGCGGTGGCGACCATACAGGCAGACGAGCGTCGGCTATACACGGTGTCTCCCAAGTTTGAGGGCTGGATCCACAAGCTCTACGTGAACGCTACCGGCCAGGCAGTAAGAAAAGGGGATGCCCTTATGGACGTGTACAGCCCAGAGCTCATCACGGCGCAACACGAGTATCTTATCGGCAGAAAAGGAATGCAATTTGCGACTGCGGAAGGCAGTCCGGAGGGTGGGGAGGCAATGCAGCGGCTGGTCGAAAGCAGCTTGCGCAGGATGCGTAACTGGGACATCTCAGAGGCTGACCTGCAGGCGCTGCAGCAGGAAGGTCAGGTCAAACATTATCTCACCTTTCGCTCCGGTGCCAGCGGCGTGGTATTGGAGAAGCCCGCCATCGAAGGCAGGCGCTTCATGCCTGGCGAGATGCTGTACGAGATCGCTGATCTCTCCACGGTATGGATATTGGCCGACGTGTTCGAACAGGACCTTGCCCTGGTTCATCGGGGGCAGAGCGCTACTATCAGGATGGCTGCGTATCCGGACAAGGTATTCAATGGCGAGGTGACGTTCATCTATCCTACGGTGATGCCGGAAACGCGGACTGCAAAGGTGCGCATCGAGCTACCCAATAATCAGGGTCTGCTCAAGCCCGCCATGTATGGAAGAGTGGAGCTGGTTTCGTTCCTCGGCAAAGACAAGGTACTCACGGTACCGGAATCGGCGGTGCTGGATAAGGGCACCCAACAGTTGGTGCTGGTTGCTCTGGGCGAGGGCCGGTTCGAGCCGCGCACGGTAAAACTCGGCATGCAAGCCGATGATTATGTTGAAGTGCTGGAGGGACTTGCCGCGGGGGAAGCGGTGGTGGTCAGCGCAAACTTTCTGATTGACGCCGAAAGTAACCTCAAGGCGGCACTGGGCGGGTTCAGTAACCATGCCGCAGGTTCGCCTGAGGGGAACGAGCAGGTCAAGTCCGGTGTGTCTGCCGCTGTCGCGGGATCCACGAGCCACCGCGGCGAGGGCAGCATCGAAGCAATGGATTGGGCGCAGGCGACGGTAACAATAGCCCACGGCCCGATCGGCAGCCTCAATTGGCCGGCGATGACAATGGATTTCCATGCCAGGGATCCAGCGTTGCTGCGGGTGTTGAAGCCCGGGCAGAAGGTGGATTTCGAAATCGTCGAGGAATCGGCTGGCGAATATGTCATCGTTCGCATTCACCCGCTAGTCGCCAGCTCGACCCCCGGCGAGCGGGGGGGTCACTGA
PROTEIN sequence
Length: 532
MKSIAKLIIVAALIGVALAAGYHWGSAKPVTPAPNPAETSAPKGKGKILYYRNPMGHPDTSPVPKKDSMGMDYLPVYEGEEPSDASGVKISTEKIQKLGVKTEVVALRELTRTVRAVATIQADERRLYTVSPKFEGWIHKLYVNATGQAVRKGDALMDVYSPELITAQHEYLIGRKGMQFATAEGSPEGGEAMQRLVESSLRRMRNWDISEADLQALQQEGQVKHYLTFRSGASGVVLEKPAIEGRRFMPGEMLYEIADLSTVWILADVFEQDLALVHRGQSATIRMAAYPDKVFNGEVTFIYPTVMPETRTAKVRIELPNNQGLLKPAMYGRVELVSFLGKDKVLTVPESAVLDKGTQQLVLVALGEGRFEPRTVKLGMQADDYVEVLEGLAAGEAVVVSANFLIDAESNLKAALGGFSNHAAGSPEGNEQVKSGVSAAVAGSTSHRGEGSIEAMDWAQATVTIAHGPIGSLNWPAMTMDFHARDPALLRVLKPGQKVDFEIVEESAGEYVIVRIHPLVASSTPGERGGH*