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cn_combo_scaffold_5619_3

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(3292..4692)

Top 3 Functional Annotations

Value Algorithm Source
Heavy metal RND efflux outer membrane protein,CzcC family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIR3_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 454.0
  • Bit_score: 649
  • Evalue 1.90e-183
Transporter {ECO:0000313|EMBL:KIO48137.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 456.0
  • Bit_score: 665
  • Evalue 7.90e-188
Outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 447.0
  • Bit_score: 624
  • Evalue 1.80e-176

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
GTGGAAAAACCAAGGTACAGCCATTACAGGTGGCTTGAATTGATCTGTGGCGGAATTATCACCGCGATCCTTGCCGCAGCTATGGGCTCGGTAAATGCACAGGCGGAAATAAATAAACCTGGCGGGGTAACAGATGCGCCCGCTTTCGCGCCCGCTCCCCTCGAGATTGCAACAACAAATAACAATCAAACTGCGCTCCTGACTACCCTGATTGCCGAAACGCTGGAGAACAACCCGGAAATTCAGGCCGCGCTACGGGAACACGCTGCCGCCAGTCAAAGAATTGCTCCCGCTGAAGCACTGGATGATCCGGTGCTTGAAGCCGGGGTAATCAACGCCCCCTTGGCATCCTCACCCTTCAGCCGGGAGGACATGACCATGAAAATGATCGGCCTGTCCCAGCGATTCCCTTTCCCAGGGAAACGCGGTTTGCGTAAAGATGTGGCCGCCAGGGATGCAGAGGCTATCGAATATGGTTATCAGGAAACCATGAACCGCGTCGTGCGCGATCTCAAGATCGCCTACTTCGATCTGGGCCTCACGCTCGAAAAGGTCCGCCTGGTCGAGAAAAACAAGCGGATCCTGGAGGATCTTCTCCACATCGCCGAGCGGCATTATGGAGTAGGCATAGGCAGCCAGGCCGATGCACTGCAGGCGCAAACGCAGGTATCCCGGATGGTGGACGAATTGCTCAGGCTCGCGCGTGAACGGCCGACGCTTGAAGCCGATCTCATTCGGGCGCTTAACCGCAACGCAACTGCTGCAGCGCCGATACCGGAGCCACCGCAATTGAGGGAAGAGGCCTTAAGTCTGGAATCCTTGCGCGAAGTGGCTCTTGCGCAGCGTCCGCAATTGCTGGCGCTTCAAAGTATCGTTGCGCGAAACGATAAAGCGGCCGAGTTGGCGCAAAAAAATTACTACCCCGACTTCGATGTACGCTTGTCGTATGGTCAACGTGACAACATGTTGGACGGCACGCGGCGGCCGGATATGGTGACCCTGACTGTGGCAATGAATCTCCCGATATGGCGCGAGAACAAACTAACTCCCCGTGTGGCGGAGACCCTGGCGCTGCGCGATCAGGCCATGGACTTGTATCAGGCACAGCGCAACGAAGTGGAGGCAAGGCTGCGCCAACAGGTGGCGATGGCCGAACAAAACCTGAGATCGGCGCGGCTCTATCAAACCGCTATTCTGCCGCAGGCCCGACTCACGGTTGAAGCATCCTTGAGCGCCTACCGCGTCAATCGCGTCGATTTCCTGACGCTGCTCGATAGCCAGATGACCGTGTTCAACTATGAAATCAGCCTGGCAACAGCCATTGCCAGCTACAACAAGGCGCTTGCGGAGATCGATTTGCTCACCGGCAGCCATCCCAGTAACACACCCGACTTGTTCTAG
PROTEIN sequence
Length: 467
VEKPRYSHYRWLELICGGIITAILAAAMGSVNAQAEINKPGGVTDAPAFAPAPLEIATTNNNQTALLTTLIAETLENNPEIQAALREHAAASQRIAPAEALDDPVLEAGVINAPLASSPFSREDMTMKMIGLSQRFPFPGKRGLRKDVAARDAEAIEYGYQETMNRVVRDLKIAYFDLGLTLEKVRLVEKNKRILEDLLHIAERHYGVGIGSQADALQAQTQVSRMVDELLRLARERPTLEADLIRALNRNATAAAPIPEPPQLREEALSLESLREVALAQRPQLLALQSIVARNDKAAELAQKNYYPDFDVRLSYGQRDNMLDGTRRPDMVTLTVAMNLPIWRENKLTPRVAETLALRDQAMDLYQAQRNEVEARLRQQVAMAEQNLRSARLYQTAILPQARLTVEASLSAYRVNRVDFLTLLDSQMTVFNYEISLATAIASYNKALAEIDLLTGSHPSNTPDLF*