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cn_combo_scaffold_5924_5

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(4821..5504)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC63_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 202.0
  • Bit_score: 185
  • Evalue 6.30e-44
transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 202.0
  • Bit_score: 185
  • Evalue 1.80e-44
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEQ52686.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="P similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 202.0
  • Bit_score: 185
  • Evalue 8.90e-44

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Taxonomy

Pelagibacterium halotolerans → Pelagibacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGACCGGAACCTCAGCCCAAAAAGTGAATAAGAAGGCGCTCCTACGCGAAGAAAGCATCTATCGGCTTACCCAAGCCGCGTTTCGTATCGTCGTTTCGAAAGGCTATCAGGCGTGCACCCTCCAGGAGATAGCCGAAGCGGCGGGACTCACCAAAGGAGCGGTATATTTCTACTTTGAGAGCAAAGAGAATCTGCTTCTGCATCTCTTGGATGTCGCTGAGAAGGATATCGTCGATCCGCTTTTCGATCATCTCAAGAATCTTTCAGCCCCAGCTGCTGAAAAGATTGCTGCCTTCTTCAAATTCACATCTCGGCAGGGCATCGATAGACCTGATGAGCTCTTATGCTTGATCAAGATGTCGATCGAGAGCCGCAGCTCCACCGAAGTGGCAGATGTGAAAATATCGGCTATCTATCAGCGCATCTACCGAATGCTCGAAGAGATTATCGAGCGAGGAAAGCTCGCGGGCGAACTCGCGACGACGCTACCCACGAAGGAGTTCGCCATGCTCGTCGTCGCGACGCACGATGGCATGATGCTGGAGTGGCACCGTCGCGGCGGGAATATTGACGGTCGGCTGTTCGTGCGGACCGTCTGGCAGACGTTTCTCAACGGGATCGTACCCCCTCCTCCGGTTGATCCCCATCTTCGCCCTTACGTCCTTTTTGCTGACCGCTCTTGA
PROTEIN sequence
Length: 228
MTGTSAQKVNKKALLREESIYRLTQAAFRIVVSKGYQACTLQEIAEAAGLTKGAVYFYFESKENLLLHLLDVAEKDIVDPLFDHLKNLSAPAAEKIAAFFKFTSRQGIDRPDELLCLIKMSIESRSSTEVADVKISAIYQRIYRMLEEIIERGKLAGELATTLPTKEFAMLVVATHDGMMLEWHRRGGNIDGRLFVRTVWQTFLNGIVPPPPVDPHLRPYVLFADRS*