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cn_combo_scaffold_6120_3

Organism: CN-SCN_Unknown

partial RP 13 / 55 MC: 2 BSCG 15 / 51 MC: 2 ASCG 5 / 38
Location: comp(1428..1880)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GRB1_THISH similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 147.0
  • Bit_score: 142
  • Evalue 4.10e-31
DNA-binding protein {ECO:0000313|EMBL:CDQ09128.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithi similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 146.0
  • Bit_score: 143
  • Evalue 2.60e-31
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 147.0
  • Bit_score: 142
  • Evalue 1.10e-31

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Taxonomy

Acidithiobacillus ferrivorans → Acidithiobacillus → Acidithiobacillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 453
ATGAACGACGCGATTCGCCACCTCGACAAGAAGCTGCTGGGCTTGCGGCCTCTCGCGAAGAATGCCCGGCCGCCGAAGGGCTGGCTTCGCGCCATCCGCAACGCCCTGGGCATGACGACGGCGCAACTGGCGCGGCGCATGGGCGTCACCCAGCCCCGCATCGTCGAACTCGAACAATCCGAAGTCGGCGGCAGCGTCACCCTGCACTCGCTGCAGCGCGCGGCGGAAGCGCTCGGGTGTCGTGTCGTTTACGCGCTCGTGCCGGACCGTCCGCTTGCCGATATCGTCCGGATGCGCGCGGAACTGATTGCCGACAAGCAACTCGCGTCCGTGCGGCACACCATGAGCCTCGAAGACCAGGCGGTTAAAGGCAAGCGAGCCGGCAAAGAACTGCGCCGGCAATTCATGGACGAACTGCTGCGGCGTCCGGCGCGTCTTTGGGACGAGAAATGA
PROTEIN sequence
Length: 151
MNDAIRHLDKKLLGLRPLAKNARPPKGWLRAIRNALGMTTAQLARRMGVTQPRIVELEQSEVGGSVTLHSLQRAAEALGCRVVYALVPDRPLADIVRMRAELIADKQLASVRHTMSLEDQAVKGKRAGKELRRQFMDELLRRPARLWDEK*